PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7dvqD_

Fold library id	PDB Header	Molecule	Title
c7dvqD_	2.89	PDB header: splicing	Chain: D: PDB Molecule: u5 small nuclear ribonucleoprotein 200 kda helicase;

Links to external resources
Added to library: Sat Apr 3 09:29:33 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence Y K P K T K E T R E T Y E V L L S F I Q A A L G D Q P R D I L C G A A D E V L A V L K N E K L R D K E R R K E I D L L L G Q T D D T R Y H V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L V N L G K K I T D Y A P R Q V L D L E D L V F T Q G S H F M A N K R C Q L P D G S F R R Q R K G Y E E V H V P A L K P K P F G S E E Q L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S T T T S
S S T T
S S
S S
S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P V E K L P K Y A Q A G F E G F K T L N R I Q S K L Y R A A L E T D E N L L L C A P T G A G K T N V A L M C M L R E I G K H I N M D G T I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B S S S S
T T T T T T
T T
B
S
T T S
T S
S S S S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence V D D F K I I Y I A P M R S L V Q E M V G S F G K R L A T Y G I T V A E L T G D H Q L C K E E I S A T Q I I V C T P E K W D I I T R K G G E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S S T T T T
B
T T T S S T T G G G
S
T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence R T Y T Q L V R L I I L D E I H L L H D D R G P V L E A L V A R A I R N I E M T Q E D V R L I G L S A T L P N Y E D V A T F L R V D P A K G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T S
T T G G G G G S T T
S
S
T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence L F Y F D N S F R P V P L E Q T Y V G I T E K K A I K R F Q I M N E I V Y E K I M E H A G K N Q V L V F V H S R K E T G K T A R A I R D M C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S
S S T T S S
S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence L E K D T L G L F L R E G S A S T E V L R T E A E Q C K N L E L K D L L P Y G F A I H H A G M T R V D R T L V E D L F A D K H I Q V L V S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T T
S S S S S T T T
S S T T T S S
G G G
S T T S
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence A T L A W G V N L P A H T V I I K G T Q V Y S P E K G R W T E L G A L D I L Q M L G R A G R P Q Y D T K G E G I L I T S H G E L Q Y Y L S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
B S S S S
T T T T
T T B S
T T T
S
G G G

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence L N Q Q L P I E S Q M V S K L P D M L N A E I V L G N V Q N A K D A V N W L G Y A Y L Y I R M L R S P T L Y G I S H D D L K G D P L L D Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S
B T T S
T
S T T

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence R L D L V H T A A L M L D K N N L V K Y D K K T G N F Q V T E L G R I A S H Y Y I T N D T V Q T Y N Q L L K P T L S E I E L F R V F S L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T T
B
T
T T
T
G

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence E F K N I T V R E E E K L E L Q K L L E R V P I P V K E S I E E P S A K I N V L L Q A F I S Q L K L E G F A L M A D M V Y V T Q S A G R L M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T
G G G T
S S
T T S
T T T T
S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence R A I F E I V L N R G W A Q L T D K T L N L C K M I D K R M W Q S M C P L R Q F R K L P E E V V K K I E K K N F P F E R L Y D L N H N E I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T B T S
T T S
G G G G S T T S
S
G G G S S S S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence E L I R M P K M G K T I H K Y V H L F P K L E L S V H L Q P I T R S T L K V E L T I T P D F Q W D E K V H G S S E A F W I L V E D V D S E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T
G G G S
T T
S
T T T T T T
T T S
B

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence I L H H E Y F L L K A K Y A Q D E H L I T F F V P V F E P L P P Q Y F I R V V S D R W L S C E T Q L P V S F R H L I L P E K Y P P P T E L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T T S
S S
S S S
T T
T T

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence D L Q P L P V S A L R N S A F E S L Y Q D K F P F F N P I Q T Q V F N T V Y N S D D N V F V G A P T G S G K T I C A E F A I L R M L L Q S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T S S S
T T
S B
T S
S
T T S
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence E G R C V Y I T P M E A L A E Q V Y M D W Y E K F Q D R L N K K V V L L T G E T S T D L K L L G K G N I I I S T P E K W D I L S R R W K Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T
S
B T T B S
T T S T T T

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence K N V Q N I N L F V V D E V H L I G G E N G P V L E V I C S R M R Y I S S Q I E R P I R I V A L S S S L S N A K D V A H W L G C S A T S T F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S G G G G G S T T
S S S
S
B T T T
G G G

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence N F H P N V R P V P L E L H I Q G F N I S H T Q T R L L S M A K P V Y H A I T K H S P K K P V I V F V P S R K Q T R L T A I D I L T T C A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
S T
S S S
S S T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence D I Q R Q R F L H C T E K D L I P Y L E K L S D S T L K E T L L N G V G Y L H E G L S P M E R R L V E Q L F S S G A I Q V V V A S R S L C W

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S B
S
T T
G G G T
T T
T T S B S G G G G S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence G M N V A A H L V I I M D T Q Y Y N G K I H A Y V D Y P I Y D V L Q M V G H A N R P L Q D D E G R C V I M C Q G S K K D F F K K F L Y E P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
B S
S T T T T
T B
T T T
S
S T T T T S
B

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence P V E S H L D H C M H D H F N A E I V T K T I E N K Q D A V D Y L T W T F L Y R R M T Q N P N Y Y N L Q G I S H R H L S D H L S E L V E Q T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S
T T S
B T T S T T S G G G T T
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence L S D L E Q S K C I S I E D E M D V A P L N L G M I A A Y Y Y I N Y T T I E L F S M S L N A K T K V R G L I E I I S N A A E Y E N I P I R H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S T T T
T T
S S T T G G G
S T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence H E D N L L R Q L A Q K V P H K L N N P K F N D P H V K T N L L L Q A H L S R M Q L S A E L Q S D T E E I L S K A I R L I Q A C V D V L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S S S
S S
T T
T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence N G W L S P A L A A M E L A Q M V T Q A M W S K D S Y L K Q L P H F T S E H I K R C T D K G V E S V F D I M E M E D E E R N A L L Q L T D S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T S
S S S
S G G G S T T
T
S T T T S S S
T T T S T T S S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence Q I A D V A R F C N R Y P N I E L S Y E V V D K D S I R S G G P V V V L V Q L E R E E E V T G P V I A P L F P Q K R E E G W W V V I G D A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T T
T T
S
S
T T
S S
G G

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . . 1790 . . . . . . . . . 1800 . . .

Sequence S N S L I S I K R L T L Q Q K A K V K L D F V A P A T G A H N Y T L Y F M S D A Y M G C D Q E Y K F S V D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G T
S S
S S S
S S
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Y	K	P	K	T	K	E	T	R	E	T	Y	E	V	L	L	S	F	I	Q	A	A	L	G	D	Q	P	R	D	I	L	C	G	A	A	D	E	V	L	A	V	L	K	N	E	K	L	R	D	K	E	R	R	K	E	I	D	L	L	L	G	Q	T	D	D	T	R	Y	H	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S																				S																				S	S			T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	V	N	L	G	K	K	I	T	D	Y	A	P	R	Q	V	L	D	L	E	D	L	V	F	T	Q	G	S	H	F	M	A	N	K	R	C	Q	L	P	D	G	S	F	R	R	Q	R	K	G	Y	E	E	V	H	V	P	A	L	K	P	K	P	F	G	S	E	E	Q	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T		S										S	T	T	T	S		S	S	T	T					S	S						S	S							S	S																T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	V	E	K	L	P	K	Y	A	Q	A	G	F	E	G	F	K	T	L	N	R	I	Q	S	K	L	Y	R	A	A	L	E	T	D	E	N	L	L	L	C	A	P	T	G	A	G	K	T	N	V	A	L	M	C	M	L	R	E	I	G	K	H	I	N	M	D	G	T	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B	S	S	S	S		T	T	T	T	T	T		T	T			B																	S								T	T	S		T															S			S	S	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	V	D	D	F	K	I	I	Y	I	A	P	M	R	S	L	V	Q	E	M	V	G	S	F	G	K	R	L	A	T	Y	G	I	T	V	A	E	L	T	G	D	H	Q	L	C	K	E	E	I	S	A	T	Q	I	I	V	C	T	P	E	K	W	D	I	I	T	R	K	G	G	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								S	S																T	T	T	T					B					T	T	T	S	S	T	T	G	G	G			S															T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	R	T	Y	T	Q	L	V	R	L	I	I	L	D	E	I	H	L	L	H	D	D	R	G	P	V	L	E	A	L	V	A	R	A	I	R	N	I	E	M	T	Q	E	D	V	R	L	I	G	L	S	A	T	L	P	N	Y	E	D	V	A	T	F	L	R	V	D	P	A	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	T	S							T	T	G	G	G	G	G	S	T	T																														S		S									T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	F	Y	F	D	N	S	F	R	P	V	P	L	E	Q	T	Y	V	G	I	T	E	K	K	A	I	K	R	F	Q	I	M	N	E	I	V	Y	E	K	I	M	E	H	A	G	K	N	Q	V	L	V	F	V	H	S	R	K	E	T	G	K	T	A	R	A	I	R	D	M	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						G	G	G		S	S												S	S																			T	T	S	S								S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	L	E	K	D	T	L	G	L	F	L	R	E	G	S	A	S	T	E	V	L	R	T	E	A	E	Q	C	K	N	L	E	L	K	D	L	L	P	Y	G	F	A	I	H	H	A	G	M	T	R	V	D	R	T	L	V	E	D	L	F	A	D	K	H	I	Q	V	L	V	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	T	T	T				S	S	S	S	S	T	T	T											S	S	T					T	T	S	S						G	G	G		S												T	T	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	T	L	A	W	G	V	N	L	P	A	H	T	V	I	I	K	G	T	Q	V	Y	S	P	E	K	G	R	W	T	E	L	G	A	L	D	I	L	Q	M	L	G	R	A	G	R	P	Q	Y	D	T	K	G	E	G	I	L	I	T	S	H	G	E	L	Q	Y	Y	L	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T					S	S				B	S					S	S	S					T	T	T	T															T	T	B	S		T	T	T		S										G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	L	N	Q	Q	L	P	I	E	S	Q	M	V	S	K	L	P	D	M	L	N	A	E	I	V	L	G	N	V	Q	N	A	K	D	A	V	N	W	L	G	Y	A	Y	L	Y	I	R	M	L	R	S	P	T	L	Y	G	I	S	H	D	D	L	K	G	D	P	L	L	D	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																						T	T	S			B									T	T	S														T									S	T	T
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	R	L	D	L	V	H	T	A	A	L	M	L	D	K	N	N	L	V	K	Y	D	K	K	T	G	N	F	Q	V	T	E	L	G	R	I	A	S	H	Y	Y	I	T	N	D	T	V	Q	T	Y	N	Q	L	L	K	P	T	L	S	E	I	E	L	F	R	V	F	S	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															T	T	S					T	T	T		B														T															T	T												T		G
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	E	F	K	N	I	T	V	R	E	E	E	K	L	E	L	Q	K	L	L	E	R	V	P	I	P	V	K	E	S	I	E	E	P	S	A	K	I	N	V	L	L	Q	A	F	I	S	Q	L	K	L	E	G	F	A	L	M	A	D	M	V	Y	V	T	Q	S	A	G	R	L	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	T	T					G	G	G										T		S	S			T	T	S		T	T														T	T				S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	R	A	I	F	E	I	V	L	N	R	G	W	A	Q	L	T	D	K	T	L	N	L	C	K	M	I	D	K	R	M	W	Q	S	M	C	P	L	R	Q	F	R	K	L	P	E	E	V	V	K	K	I	E	K	K	N	F	P	F	E	R	L	Y	D	L	N	H	N	E	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	B																	T	S		T	T	S		G	G	G	G	S	T	T	S											S				G	G	G	S	S	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	E	L	I	R	M	P	K	M	G	K	T	I	H	K	Y	V	H	L	F	P	K	L	E	L	S	V	H	L	Q	P	I	T	R	S	T	L	K	V	E	L	T	I	T	P	D	F	Q	W	D	E	K	V	H	G	S	S	E	A	F	W	I	L	V	E	D	V	D	S	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T		G	G	G											S														T	T												S				T	T	T	T	T	T											T	T	S		B
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	I	L	H	H	E	Y	F	L	L	K	A	K	Y	A	Q	D	E	H	L	I	T	F	F	V	P	V	F	E	P	L	P	P	Q	Y	F	I	R	V	V	S	D	R	W	L	S	C	E	T	Q	L	P	V	S	F	R	H	L	I	L	P	E	K	Y	P	P	P	T	E	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	T	T	T	T	S												S	S			S									S	S		T	T										T	T
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	D	L	Q	P	L	P	V	S	A	L	R	N	S	A	F	E	S	L	Y	Q	D	K	F	P	F	F	N	P	I	Q	T	Q	V	F	N	T	V	Y	N	S	D	D	N	V	F	V	G	A	P	T	G	S	G	K	T	I	C	A	E	F	A	I	L	R	M	L	L	Q	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						B	T	T	S	S	S										T	T		S	B													T	S			S								T	T	S																		S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	E	G	R	C	V	Y	I	T	P	M	E	A	L	A	E	Q	V	Y	M	D	W	Y	E	K	F	Q	D	R	L	N	K	K	V	V	L	L	T	G	E	T	S	T	D	L	K	L	L	G	K	G	N	I	I	I	S	T	P	E	K	W	D	I	L	S	R	R	W	K	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S								S																T													S									B	T	T	B	S						T	T								S	T	T	T
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	K	N	V	Q	N	I	N	L	F	V	V	D	E	V	H	L	I	G	G	E	N	G	P	V	L	E	V	I	C	S	R	M	R	Y	I	S	S	Q	I	E	R	P	I	R	I	V	A	L	S	S	S	L	S	N	A	K	D	V	A	H	W	L	G	C	S	A	T	S	T	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T		S						S	G	G	G	G	G	S	T	T																		S	S	S									S		B	T	T									T			G	G	G
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	N	F	H	P	N	V	R	P	V	P	L	E	L	H	I	Q	G	F	N	I	S	H	T	Q	T	R	L	L	S	M	A	K	P	V	Y	H	A	I	T	K	H	S	P	K	K	P	V	I	V	F	V	P	S	R	K	Q	T	R	L	T	A	I	D	I	L	T	T	C	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	T			S	S													S								T													S	S	S							S	S	T	T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	D	I	Q	R	Q	R	F	L	H	C	T	E	K	D	L	I	P	Y	L	E	K	L	S	D	S	T	L	K	E	T	L	L	N	G	V	G	Y	L	H	E	G	L	S	P	M	E	R	R	L	V	E	Q	L	F	S	S	G	A	I	Q	V	V	V	A	S	R	S	L	C	W
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T					S	B		S										T	T										G	G	G	T						T	T															T	T	S	B	S						G	G	G	G	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	G	M	N	V	A	A	H	L	V	I	I	M	D	T	Q	Y	Y	N	G	K	I	H	A	Y	V	D	Y	P	I	Y	D	V	L	Q	M	V	G	H	A	N	R	P	L	Q	D	D	E	G	R	C	V	I	M	C	Q	G	S	K	K	D	F	F	K	K	F	L	Y	E	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					B	S								S				T	T	T	T																T	B			T	T	T		S										S	T	T								T	T	S		B
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	P	V	E	S	H	L	D	H	C	M	H	D	H	F	N	A	E	I	V	T	K	T	I	E	N	K	Q	D	A	V	D	Y	L	T	W	T	F	L	Y	R	R	M	T	Q	N	P	N	Y	Y	N	L	Q	G	I	S	H	R	H	L	S	D	H	L	S	E	L	V	E	Q	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	S											T	T	S			B									T	T	S							T	T	S	G	G	G	T	T					S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	L	S	D	L	E	Q	S	K	C	I	S	I	E	D	E	M	D	V	A	P	L	N	L	G	M	I	A	A	Y	Y	Y	I	N	Y	T	T	I	E	L	F	S	M	S	L	N	A	K	T	K	V	R	G	L	I	E	I	I	S	N	A	A	E	Y	E	N	I	P	I	R	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T	T	S					T	T	T																														T	T												S	S	T	T	G	G	G				S	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	H	E	D	N	L	L	R	Q	L	A	Q	K	V	P	H	K	L	N	N	P	K	F	N	D	P	H	V	K	T	N	L	L	L	Q	A	H	L	S	R	M	Q	L	S	A	E	L	Q	S	D	T	E	E	I	L	S	K	A	I	R	L	I	Q	A	C	V	D	V	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											T	S	S	S			S	S			T	T															T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	N	G	W	L	S	P	A	L	A	A	M	E	L	A	Q	M	V	T	Q	A	M	W	S	K	D	S	Y	L	K	Q	L	P	H	F	T	S	E	H	I	K	R	C	T	D	K	G	V	E	S	V	F	D	I	M	E	M	E	D	E	E	R	N	A	L	L	Q	L	T	D	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																		T	S		S	S	S		S	G	G	G	S	T	T													T			S	T	T	T	S	S	S			T	T	T	S	T	T	S	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	Q	I	A	D	V	A	R	F	C	N	R	Y	P	N	I	E	L	S	Y	E	V	V	D	K	D	S	I	R	S	G	G	P	V	V	V	L	V	Q	L	E	R	E	E	E	V	T	G	P	V	I	A	P	L	F	P	Q	K	R	E	E	G	W	W	V	V	I	G	D	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S										T	T	T	T				T	T													S				S					T	T		S	S													G	G
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.	1790	.	.	.	.	.	.	.	.	.	1800	.	.	.
Sequence	S	N	S	L	I	S	I	K	R	L	T	L	Q	Q	K	A	K	V	K	L	D	F	V	A	P	A	T	G	A	H	N	Y	T	L	Y	F	M	S	D	A	Y	M	G	C	D	Q	E	Y	K	F	S	V	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	T											S	S												S	S	S											S	S		S	S