PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7dutA_

Fold library id	PDB Header	Molecule	Title
c7dutA_	2.10	PDB header: dna binding protein	Chain: A: PDB Molecule: soj protein (soj);

Links to external resources
Added to library: Sat Dec 25 08:48:25 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M I V T V I N Q K G G V G K T T T S V N L S Y Y L S K E K K T G L L D L D P E G G A T I S Y G M K R E L K E L P L G E K S V N I F N V E V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S S T T S
T T
T T
B S S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence P A H I G L L K L E L N G D V E E I S N K I K E I G K Q F D F L V I D T P P N L G T L A I S A M L V A D R I V S P V T P Q P L A L E A I K N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T
T T
S
S S S S T
S
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L D S R L K S I G K N A Y S F T N F S K K V V K L D N L S S V K F T E I T I P P S R L F I E A S R L G V P A L R Y E E V R I K K P K L A N Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
S S
T T
T T
T S
S S S

. . . . . . . . . 220

Sequence Y Q Q L A K V I S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	I	V	T	V	I	N	Q	K	G	G	V	G	K	T	T	T	S	V	N	L	S	Y	Y	L	S	K	E	K	K	T	G	L	L	D	L	D	P	E	G	G	A	T	I	S	Y	G	M	K	R	E	L	K	E	L	P	L	G	E	K	S	V	N	I	F	N	V	E	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S	T	T	S	S														T	T	S									T	T							T	T				B	S	S				T	T							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	P	A	H	I	G	L	L	K	L	E	L	N	G	D	V	E	E	I	S	N	K	I	K	E	I	G	K	Q	F	D	F	L	V	I	D	T	P	P	N	L	G	T	L	A	I	S	A	M	L	V	A	D	R	I	V	S	P	V	T	P	Q	P	L	A	L	E	A	I	K	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	T																							T	T		S								S	S	S	S									T		S								S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	D	S	R	L	K	S	I	G	K	N	A	Y	S	F	T	N	F	S	K	K	V	V	K	L	D	N	L	S	S	V	K	F	T	E	I	T	I	P	P	S	R	L	F	I	E	A	S	R	L	G	V	P	A	L	R	Y	E	E	V	R	I	K	K	P	K	L	A	N	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T									S		S	S					T	T		T	T																					T	S										S	S	S
	.	.	.	.	.	.	.	.	.	220
Sequence	Y	Q	Q	L	A	K	V	I	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)