PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7dkaA_

Fold library id	PDB Header	Molecule	Title
c7dkaA_	1.56	PDB header: oxidoreductase	Chain: A: PDB Molecule: dsba domain-containing protein;

Links to external resources
Added to library: Sat Nov 27 08:26:44 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A Q P T D L Y F D F L S P Y A W R G V E M A H V L R G S G E G F R L R H F S L V Q G N H P Q N K D Q E T V Q W W L T D Q P L G A E G G S G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
G G G T
T
G G G T T
S S
G G G S
T T
S G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M K Y Q R P S L N A F L A A H A A A R Q G E E K S W A F A L A L F R L H H E D K R D L D E A A F Q D A A T R A G L D L S Q W K Q D R Q D E A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T T
T S
S S T T
T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G L R R E L R A D L E A A A A L G V F G T P T F D L G G G D V A Y F K F E E L T R D P Q A A R D L W N L F T S T L R S E A R V A T I R R P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T T
S S
S
T T

.

Sequence P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	Q	P	T	D	L	Y	F	D	F	L	S	P	Y	A	W	R	G	V	E	M	A	H	V	L	R	G	S	G	E	G	F	R	L	R	H	F	S	L	V	Q	G	N	H	P	Q	N	K	D	Q	E	T	V	Q	W	W	L	T	D	Q	P	L	G	A	E	G	G	S	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T															G	G	G	T														T		G	G	G	T	T		S	S					G	G	G	S		T	T					S	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	K	Y	Q	R	P	S	L	N	A	F	L	A	A	H	A	A	A	R	Q	G	E	E	K	S	W	A	F	A	L	A	L	F	R	L	H	H	E	D	K	R	D	L	D	E	A	A	F	Q	D	A	A	T	R	A	G	L	D	L	S	Q	W	K	Q	D	R	Q	D	E	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G																T	T																		T	S				S	S											T	T											T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	L	R	R	E	L	R	A	D	L	E	A	A	A	A	L	G	V	F	G	T	P	T	F	D	L	G	G	G	D	V	A	Y	F	K	F	E	E	L	T	R	D	P	Q	A	A	R	D	L	W	N	L	F	T	S	T	L	R	S	E	A	R	V	A	T	I	R	R	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T			S	S	S						T	T								S	S				S																		T	T
	.
Sequence	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)