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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7d27A_

Fold library idPDB HeaderMoleculeTitle
c7d27A_2.48PDB header: ligaseChain: A: PDB Molecule: udp-n-acetylmuramoyl-l-alanyl-d-glutamate--2,6-


Added to library: Sat Jul 31 09:03:17 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTVSFQEIHPIEIDAQWPRQPFYGFSLDSRKVETGQIFIALTSYQPEKTRTFAEAALANGALAVISETEL
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Known secondary structure (DSSP)


BS



S
SGGGSB


S
TTT

TT





TT
SSS

 .........80.........90.........100.........110.........120.........130.........140
Sequence GVANEWVCPDVRQRMGEWQKRYLQQADVVKPLRIIAVTGTNGKTTISRLIAELISSQQQRCAVMGTTGNG
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Known secondary structure (DSSP)

SS
TT





SSSTT

TT
 .........150.........160.........170.........180.........190.........200.........210
Sequence ILPNLTPHTTLDALQLQNALHDYAKQGATFASLEASSHGLEQGRLNGCDIEIAVYSNLSRDHLYHGTLEA
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Known secondary structure (DSSP) TT





S

TT



TTTTTT





S




S
 .........220.........230.........240.........250.........260.........270.........280
Sequence YAEAKARLFQFNSLKVAVINLDDAHADLMIKSAQNNPAQPKILTYSLTQNTADYYIADLDYSLAGATFNL
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Known secondary structure (DSSP) GGGG
TT
STTSTTT
TT


SS
TTSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence VSQQGSFAVESPLLGHFNVENLIAALIAAEQAGFDLQALVDFVPKLIGAPGRMQVIRDDERLFVVDYAHT
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Known secondary structure (DSSP) TT


STT

GGG





S
SS



S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PDALIQVLKTLKRHVSNQLWAVFGCGGDRDRGKRPLMTQAALDGANPVILTSDNPRTEDPEQIFADMKQG
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Known secondary structure (DSSP) TT
SS



SSS
GGG
BS

S

BTS
TT
 .........430.........440.........450.........460.........470.........480.......
Sequence IDFSGHRMHEIHDRREAIKFVAEQAQAGDIVVIAGKGHENYQEINGVRHWFDDVVEVRSAIDAQHHT
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Known secondary structure (DSSP)


TTS


S

TT
S
TT

TT

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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