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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7bvtA_

Fold library idPDB HeaderMoleculeTitle
c7bvtA_1.47PDB header: sugar binding proteinChain: A: PDB Molecule: hypothetical sugar abc-transporter sugar binding protein;


Added to library: Sat Dec 5 09:31:31 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GPVEVTVWHYWDGTNADAFDAMVDTYNASQSDVRISASNVPNSDFLTKLRASATSDTLPDIAIGDLVWVP
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Known secondary structure (DSSP)




T
SS

GGGT


SGGG
 .........80.........90.........100.........110.........120.........130.........140
Sequence QIADIGTLADLNGRIPDDTLTDVNDALTSFGTIDGKQVSVPVSANNLGYMYNKTLFAEAGLDPENPPTTW
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Known secondary structure (DSSP) S
B


BTTB
B
TTT

S
BTT

TT



B
 .........150.........160.........170.........180.........190.........200.........210
Sequence DELKAAGQTILDETGKPGYDLYTQAGDSGEGLTWNFQVNLWQAGGDFLTADNSAAAFNTPEGAEALQYWV
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Known secondary structure (DSSP) SS
SSB




TTTSTT

SB
TTSSSB


S
 .........220.........230.........240.........250.........260.........270.........280
Sequence DLIDSGVSPYAKWGEFEKGQGGSAQEGSWMVGIWAADPPFEFGTAQVPYPSDGEPATNLGGEQAMVFENS
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Known secondary structure (DSSP) TTSS
TT
TTTTTTT
SSTS
SS



B
TTS



B


 .........290.........300.........310.........320.........330.........340.........350
Sequence DAEDDAAADFLSWFLEPDQVTEWSKETGMLPVLDSVATGSAYLEWVESTEPRLLPYVEQMADAHARPNTA
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Known secondary structure (DSSP) TST
B
SBT

GGGGGGG




T
 .........360.........370.........380.........390.
Sequence LYPTVSLAFAQEIEKALAGEASVDDALDAAEQAVNAVLKNG
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Known secondary structure (DSSP) TTTSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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