PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7bvfA_

Fold library id	PDB Header	Molecule	Title
c7bvfA_	2.97	PDB header: transferase	Chain: A: PDB Molecule: probable arabinosyltransferase a;

Links to external resources
Added to library: Sat May 2 08:26:45 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence R S H R I A R L A A V V S G I A G L L L C G I V P L L P V N Q T T A T I F W P Q G S T A D G N I T Q I T A P L V S G A P R A L D I S I P C S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S G G G S
S S S
B S S S S
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A I A T L P A N G G L V L S T L P A G G V D T G K A G L F V R A N Q D T V V V A F R D S V A A V A A R S T I A A G G C S A L H I W A D T G G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T T
S S S
T T S S S
T T T S
S S
S S S
S T T G G G T
S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence A G A D F M G I P G G A G T L P P E K K P Q V G G I F T D L K V G A Q P G L S A R V D I D T R F I T T P G A L K K A V M L L G V L A V L V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
G G G
T T
S
T T
S
B
S T T S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence M V G L A A L D R L S R G R T L R D W L T R Y R P R V R V G F A S R L A D A A V I A T L L L W H V I G A T S S D D G Y L L T V A R V A P K A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S T T
S
T T T T T T S
S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence G Y V A N Y Y R Y F G T T E A P F D W Y T S V L A Q L A A V S T A G V W M R L P A T L A G I A C W L I V S R F V L R R L G P G P G G L A S N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
B
S S S G G G
B
T T
T T
T S S
S S S S S S S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence R V A V F T A G A V F L S A W L P F N N G L R P E P L I A L G V L V T W V L V E R S I A L G R L A P A A V A I I V A T L T A T L A P Q G L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T T
S S S S T
S T T S
G G G G G

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence A L A P L L T G A R A I A Q R I R R R R A T D G L L A P L A V L A A A L S L I T V V V F R D Q T L A T V A E S A R I K Y K V G P T I A W Y Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G T T S
S S S
S S T G G G T S S S S
S S
G G G

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence D F L R Y Y F L T V E S N V E G S M S R R F A V L V L L F C L F G V L F V L L R R G R V A G L A S G P A W R L I G T T A V G L L L L T F T P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T T T S T T T S
S S
G G G
T T T S S S
S S S
G G G
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence T K W A V Q F G A F A G L A G V L G A V T A F T F A R I G L H S R R N L T L Y V T A L L F V L A W A T S G I N G W F Y V G N Y G V P W Y D I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S G G G G G G T T S S
S T T S
S S S T T S S
T T S S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence Q P V I A S H P V T S M F L T L S I L T G L L A A W Y H F R M D Y A G H T E V K D N R R N R I L A S T P L L V V A V I M V A G E V G S M A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B S S S S B T T S S
S
S S T T G G G S S
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence A A V F R Y P L Y T T A K A N L T A L S T G L S S C A M A D D V L A E P D P N A G M L Q P V P G Q A F G P D G P L G G I S P V G F K P E G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S S T T
S S S S S S
T T S
B
S S
B T T B T T T
S
S S
B T T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence G E D L K S D P V V S K P G L V N S D A S P N K P N A A I T D S A G T A G G K G P V G I N G S H A A L P F G L D P A R T P V M G S Y G E N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S S
S S S
S S
S
S
S S S
S T T
G G G
B B
S
S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence L A A T A T S A W Y Q L P P R S P D R P L V V V S A A G A I W S Y K E D G D F I Y G Q S L K L Q W G V T G P D G R I Q P L G Q V F P I D I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T
S
B
S S S
B
B
S S S
B
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence P Q P A W R N L R F P L A W A P P E A D V A R I V A Y D P N L S P E Q W F A F T P P R V P V L E S L Q R L I G S A T P V L M D I A T A A N F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
T T S S
S S
B
T T
B
B
T
S S S
S G G G S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence P C Q R P F S E H L G I A E L P Q Y R I L P D H K Q T A A S S N L W Q S S S T G G P F L F T Q A L L R T S T I A T Y L R G D W Y R D W G S V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S
T S
T T T T S G G G T T T T S
B T T
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . .

Sequence E Q Y H R L V P A D Q A P D A V V E E G V I T V P G W G R P G P I R A L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T T S
B
S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	R	S	H	R	I	A	R	L	A	A	V	V	S	G	I	A	G	L	L	L	C	G	I	V	P	L	L	P	V	N	Q	T	T	A	T	I	F	W	P	Q	G	S	T	A	D	G	N	I	T	Q	I	T	A	P	L	V	S	G	A	P	R	A	L	D	I	S	I	P	C	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T																		T	T	S	G	G	G	S																	S	S	S									B	S	S	S	S		S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	I	A	T	L	P	A	N	G	G	L	V	L	S	T	L	P	A	G	G	V	D	T	G	K	A	G	L	F	V	R	A	N	Q	D	T	V	V	V	A	F	R	D	S	V	A	A	V	A	A	R	S	T	I	A	A	G	G	C	S	A	L	H	I	W	A	D	T	G	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S		T	T				S			S	S		T	T	S	S	S		T	T	T	S							S	S						S	S	S								S	T	T	G	G	G	T											S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	A	G	A	D	F	M	G	I	P	G	G	A	G	T	L	P	P	E	K	K	P	Q	V	G	G	I	F	T	D	L	K	V	G	A	Q	P	G	L	S	A	R	V	D	I	D	T	R	F	I	T	T	P	G	A	L	K	K	A	V	M	L	L	G	V	L	A	V	L	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T		G	G	G						T	T						S												T	T											S			B			S	T	T	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	M	V	G	L	A	A	L	D	R	L	S	R	G	R	T	L	R	D	W	L	T	R	Y	R	P	R	V	R	V	G	F	A	S	R	L	A	D	A	A	V	I	A	T	L	L	L	W	H	V	I	G	A	T	S	S	D	D	G	Y	L	L	T	V	A	R	V	A	P	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T			S	S	S	T	T				S							T	T	T														T	T	T	S					S	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	G	Y	V	A	N	Y	Y	R	Y	F	G	T	T	E	A	P	F	D	W	Y	T	S	V	L	A	Q	L	A	A	V	S	T	A	G	V	W	M	R	L	P	A	T	L	A	G	I	A	C	W	L	I	V	S	R	F	V	L	R	R	L	G	P	G	P	G	G	L	A	S	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		B		S	S	S	G	G	G		B			T	T		T	T																		T	S																					S			S	S	S	S	S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	R	V	A	V	F	T	A	G	A	V	F	L	S	A	W	L	P	F	N	N	G	L	R	P	E	P	L	I	A	L	G	V	L	V	T	W	V	L	V	E	R	S	I	A	L	G	R	L	A	P	A	A	V	A	I	I	V	A	T	L	T	A	T	L	A	P	Q	G	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S															T	T	T			S	S	S	S																						T		S														T	T	S		G	G	G	G	G
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	A	L	A	P	L	L	T	G	A	R	A	I	A	Q	R	I	R	R	R	R	A	T	D	G	L	L	A	P	L	A	V	L	A	A	A	L	S	L	I	T	V	V	V	F	R	D	Q	T	L	A	T	V	A	E	S	A	R	I	K	Y	K	V	G	P	T	I	A	W	Y	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G						T	T										S		S	S	S		S	S									T	G	G	G	T					S	S	S	S															S	S					G	G	G
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	D	F	L	R	Y	Y	F	L	T	V	E	S	N	V	E	G	S	M	S	R	R	F	A	V	L	V	L	L	F	C	L	F	G	V	L	F	V	L	L	R	R	G	R	V	A	G	L	A	S	G	P	A	W	R	L	I	G	T	T	A	V	G	L	L	L	L	T	F	T	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T	S	T	T	T	S		S	S		G	G	G		T	T	T																				S	S	S			S	S	S																			G	G	G		S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	T	K	W	A	V	Q	F	G	A	F	A	G	L	A	G	V	L	G	A	V	T	A	F	T	F	A	R	I	G	L	H	S	R	R	N	L	T	L	Y	V	T	A	L	L	F	V	L	A	W	A	T	S	G	I	N	G	W	F	Y	V	G	N	Y	G	V	P	W	Y	D	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	G	G	G	G	G	G																		T	T	S	S		S																		T	T	S					S	S	S	T	T	S	S		T	T	S	S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	P	V	I	A	S	H	P	V	T	S	M	F	L	T	L	S	I	L	T	G	L	L	A	A	W	Y	H	F	R	M	D	Y	A	G	H	T	E	V	K	D	N	R	R	N	R	I	L	A	S	T	P	L	L	V	V	A	V	I	M	V	A	G	E	V	G	S	M	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			B	S	S	S	S	B																							T	T	S	S		S						S	S	T	T	G	G	G	S	S		S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	A	V	F	R	Y	P	L	Y	T	T	A	K	A	N	L	T	A	L	S	T	G	L	S	S	C	A	M	A	D	D	V	L	A	E	P	D	P	N	A	G	M	L	Q	P	V	P	G	Q	A	F	G	P	D	G	P	L	G	G	I	S	P	V	G	F	K	P	E	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S		S	S												S	S	T	T				S	S	S	S	S					S		T	T	S					B		S	S				B	T	T	B	T	T	T		S			S	S		B	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	E	D	L	K	S	D	P	V	V	S	K	P	G	L	V	N	S	D	A	S	P	N	K	P	N	A	A	I	T	D	S	A	G	T	A	G	G	K	G	P	V	G	I	N	G	S	H	A	A	L	P	F	G	L	D	P	A	R	T	P	V	M	G	S	Y	G	E	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S											S	S		S	S					S	S	S									S	S		S					S			S	S	S						S	T	T			G	G	G				B	B			S			S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	L	A	A	T	A	T	S	A	W	Y	Q	L	P	P	R	S	P	D	R	P	L	V	V	V	S	A	A	G	A	I	W	S	Y	K	E	D	G	D	F	I	Y	G	Q	S	L	K	L	Q	W	G	V	T	G	P	D	G	R	I	Q	P	L	G	Q	V	F	P	I	D	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																T	T										S		B					S	S	S						B					B						S	S	S											B			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	P	Q	P	A	W	R	N	L	R	F	P	L	A	W	A	P	P	E	A	D	V	A	R	I	V	A	Y	D	P	N	L	S	P	E	Q	W	F	A	F	T	P	P	R	V	P	V	L	E	S	L	Q	R	L	I	G	S	A	T	P	V	L	M	D	I	A	T	A	A	N	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S	S								T	T	S	S		S	S					B										T	T					B				B											T		S	S	S						S	G	G	G	S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	P	C	Q	R	P	F	S	E	H	L	G	I	A	E	L	P	Q	Y	R	I	L	P	D	H	K	Q	T	A	A	S	S	N	L	W	Q	S	S	S	T	G	G	P	F	L	F	T	Q	A	L	L	R	T	S	T	I	A	T	Y	L	R	G	D	W	Y	R	D	W	G	S	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S							T	T						S													T					S		T	T	T	T	S	G	G	G	T	T	T	T	S						B					T	T		T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.
Sequence	E	Q	Y	H	R	L	V	P	A	D	Q	A	P	D	A	V	V	E	E	G	V	I	T	V	P	G	W	G	R	P	G	P	I	R	A	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S		T	T	T	S		B												S	S