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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7b9sV_

Fold library idPDB HeaderMoleculeTitle
c7b9sV_3.40PDB header: transport proteinChain: V: PDB Molecule: eccc5;


Added to library: Sat Jul 10 08:38:20 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APVVKPENIVLPTPLSVPPPEGKPWWLVVVGVLVVGLLVGMVGMTVASGSRLFLGAGAIFPIFMIGGVAM
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Known secondary structure (DSSP)










B









TT

 .........80.........90.........100.........110.........120.........130.........140
Sequence MMFGGRFGGQQQMSRPKLDAMRAQFMLMLDMLRETAQESADSMDANYRWFHPAPTTLAAAVGSSRMWERQ
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Known secondary structure (DSSP) GGGT



TTS

GGGGGG
SSSTT



S
 .........150.........160.........170.........180.........190.........200.........210
Sequence PDGKDLNFGVVRVGVGMTRPEVTWGEPQNMPTDIELEPVTGKALQEFGRYQSVVYNLPKMVSLLVEPWYS
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Known secondary structure (DSSP) TTTTS

S


S


TTTB
TT
TTT
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence LVGEREQVLGLTRAIICQLAFSHGPDHVQMIVVTSDPDRWDWVKWIPHFGDPRRRDAAGNARMVYTSVRE
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Known secondary structure (DSSP) S
S
TTT

S
GGGGGGGGG
GGG
SSS
SSSTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence FATEQAELFAGRGSFTTPTPHHVIISDIEDPQWEYVISSEGVDGVTFFDLTGSPLWTGAPQRVLRFTDSA
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Known secondary structure (DSSP)



SSSS









SS
S

TTS
SS

TTSS

TTT
S
GGGTT
 .........360.........370.........380.........390......
Sequence GVIETLPRDRDTWMVIDDNAWFFALADQMSEADAEQFAHQMAHWRL
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Known secondary structure (DSSP) T

B
TTT

B

SS




TT



Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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