PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c7ariF_

Fold library id	PDB Header	Molecule	Title
c7ariF_	3.40	PDB header: protein transport	Chain: F: PDB Molecule: lipoprotein-releasing system atp-binding protein lold;

Links to external resources
Added to library: Sat Apr 10 09:25:54 2021

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K I L L Q C D N L C K R Y Q E G S V Q T D V L H N V S F S V G E G E M M A I V G S S G S G K S T L L H L L G G L D T P T S G D V I F N G Q P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
T T S S
S S
S S
T T S S T S S
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M S K L S S A A K A E L R N Q K L G F I Y Q F H H L L P D F T A L E N V A M P L L I G K K K P A E I N S R A L E M L K A V G L D H R A N H R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T T S T T S
S S
T T S
T T T
T T T T
G G G S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P S E L S G G E R Q R V A I A R A L V N N P R L V L A D E P T G N L D A R N A D S I F Q L L G E L N R L Q G T A F L V V T H D L Q L A K R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T S
T T T T T T S S
S
S S S
S S
S S S
S
S S S

. . . . . . . . . 220 . . .

Sequence S R Q L E M R D G R L T A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	I	L	L	Q	C	D	N	L	C	K	R	Y	Q	E	G	S	V	Q	T	D	V	L	H	N	V	S	F	S	V	G	E	G	E	M	M	A	I	V	G	S	S	G	S	G	K	S	T	L	L	H	L	L	G	G	L	D	T	P	T	S	G	D	V	I	F	N	G	Q	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S										S		T	T	S	S				S	S									S	S									T	T	S	S										T	S	S			S	S						T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	S	K	L	S	S	A	A	K	A	E	L	R	N	Q	K	L	G	F	I	Y	Q	F	H	H	L	L	P	D	F	T	A	L	E	N	V	A	M	P	L	L	I	G	K	K	K	P	A	E	I	N	S	R	A	L	E	M	L	K	A	V	G	L	D	H	R	A	N	H	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T			T	T	T	S	T	T					S						S	S					T	T	S							T						T	T															T	T	T	T		G	G	G	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	S	E	L	S	G	G	E	R	Q	R	V	A	I	A	R	A	L	V	N	N	P	R	L	V	L	A	D	E	P	T	G	N	L	D	A	R	N	A	D	S	I	F	Q	L	L	G	E	L	N	R	L	Q	G	T	A	F	L	V	V	T	H	D	L	Q	L	A	K	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	T	T	S		T	T	T	T	T								T	S	S			S									S	S	S		S																	S									S	S	S		S		S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	S	R	Q	L	E	M	R	D	G	R	L	T	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S						S	S	S