| 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence |
M | N | I | A | Q | P | V | S | S | E | I | K | S | V | K | F | G | I | Y | D | V | D | D | V | E | K | I | S | V | K | Q | I | V | N | P | V | L | L | D | N | L | N | H | P | T | N | G | G | L | Y | D | L | A | L | G | P | Y | L | K | N | S | V | C | A | T | C | H | L | D | E |
Predicted secondary structure |
|
|
|
|
|
|  |  |  |  |  |  |
|  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
| T | T |
|
|
|
|
|
|
|
|
| B |
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|  |  |
|
|
|
|
|
| B |
| T | T |
| S | B |
| T | T | S | T | T |
| T | T | T |
|
|
| T | T | T |
|
|
| T | T | T |
| S |
| T |
  | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence |
R | Y | C | P | G | H | F | G | H | I | V | L | P | I | P | A | Y | H | P | L | F | F | S | Q | M | Y | N | L | L | R | S | T | C | L | Y | C | H | H | F | K | L | S | K | V | K | V | H | L | F | F | C | R | L | K | L | L | D | Y | G | L | L | N | E | S | E | M | V | E | N | V |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T | T |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
| T | T | T |  |  |  |  |  |  |  |  |  | T | B |
| T | T | T | S | S | B | S | S |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
| S |  |  |  |  | G | G | G |
|
|
  | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence |
S | L | A | K | D | A | A | T | L | M | R | I | R | D | E | F | V | A | K | S | I | A | D | S | R | Q | L | T | T | L | L | L | H | E | R | K | K | V | V | R | A | F | Y | H | A | I | S | S | R | K | Q | C | D | N | C | Q | S | F | S | P | N | F | R | K | E | G | F | A | K | I |
Predicted secondary structure |
 |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
| B |
| S | S | S |
| S | B |
|
|
|
|
|
|
| T | T | T |
|
|
  | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence |
F | E | I | P | L | S | G | K | N | L | Q | F | K | Y | M | T | S | T | E | V | R | N | H | L | R | R | L | F | V | K | E | N | V | V | L | S | R | L | Y | P | A | S | A | D | M | F | F | L | Q | N | I | A | V | P | P | T | R | F | R | P | N | I | Q | N | E | L | L | T | R | I |
Predicted secondary structure |
 |  |
|
|
|
|
|
|
|  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  | S |
|  |  |  |  |  |  |
|
|
|
| S | G | G | G |  |  |  |  |  |  |  |
|
| T | T | T |
|
|
|  |  |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . | . | . | . | 340 | . | . | . | . | . | . | . | . | . | 350 |
Sequence |
L | Q | S | S | I | Q | I | A | S | L | S | K | D | S | T | V | E | E | R | R | S | R | A | F | E | L | L | I | N | A | F | V | Q | L | Q | H | D | V | N | S | L | I | D | S | N | R | N | P | P | P | G | I | K | Q | I | L | E | K | K | E | G | L | F | R | K | H | M | M | G | K |
Predicted secondary structure |
 |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|  |  |  |
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
| S | S | S |
|
|
|
|
|  |  |  |  |  | T | T | S | S | S | T | T | T | T | T | T | T | S |
|
  | . | . | . | . | . | . | . | . | . | 360 | . | . | . | . | . | . | . | . | . | 370 | . | . | . | . | . | . | . | . | . | 380 | . | . | . | . | . | . | . | . | . | 390 | . | . | . | . | . | . | . | . | . | 400 | . | . | . | . | . | . | . | . | . | 410 | . | . | . | . | . | . | . | . | . | 420 |
Sequence |
R | V | N | Y | A | A | R | S | V | I | S | P | D | P | N | I | E | T | N | E | I | G | V | P | P | V | F | A | T | K | L | T | Y | P | E | P | V | T | L | Y | N | F | N | E | M | R | N | A | V | I | N | G | P | H | K | W | P | G | A | S | H | I | Q | N | E | D | G | T | L | I |
Predicted secondary structure |
|
|
|
|
|
|
|  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |
|
|
|
|
|  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
| S | S |  |  |  |  |
|  |  |  |
| S | S | S |
| S | S |
|  |  |  |
|  |  |  |  |  |  |
|  |  |
|
| B |
|
| S | S | T |  |  |  |  |  |  |  |  |  |  |
| T | T | S | T | T |
|  |  |  |  |  |
| S | S | S |
|  |  |
  | . | . | . | . | . | . | . | . | . | 430 | . | . | . | . | . | . | . | . | . | 440 | . | . | . | . | . | . | . | . | . | 450 | . | . | . | . | . | . | . | . | . | 460 | . | . | . | . | . | . | . | . | . | 470 | . | . | . | . | . | . | . | . | . | 480 | . | . | . | . | . | . | . | . | . | 490 |
Sequence |
S | L | M | P | L | T | I | E | Q | R | T | A | L | A | N | Q | L | L | T | P | Q | S | N | L | I | S | S | P | Y | S | Y | S | R | L | I | N | T | N | K | K | V | Y | R | H | V | R | N | G | D | M | L | I | L | N | R | Q | P | T | L | H | K | P | S | M | M | A | H | K | A | R |
Predicted secondary structure |
 |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
| S | S | S |
|  |  |  |  |  |  |  |  |  | T | S | S | S |
|
|
| S | S | T | T | S | S | S | S |
| T | T | G | G | G |
|
|
|  |  |  |  |  |
|
| T | T |
|  |  |  |  |  |
| S | S |
|
| S | G | G | G |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 500 | . | . | . | . | . | . | . | . | . | 510 | . | . | . | . | . | . | . | . | . | 520 | . | . | . | . | . | . | . | . | . | 530 | . | . | . | . | . | . | . | . | . | 540 | . | . | . | . | . | . | . | . | . | 550 | . | . | . | . | . | . | . | . | . | 560 |
Sequence |
I | L | P | G | E | K | T | I | R | M | H | Y | A | N | C | N | S | Y | N | A | D | F | D | G | D | E | M | N | M | H | F | P | Q | S | T | N | A | R | S | E | A | Q | F | I | A | N | T | D | S | Q | Y | L | V | P | T | S | G | D | P | L | R | G | L | I | Q | D | H | V | V | M |
Predicted secondary structure |
 |  |
|
|
|
|  |  |  |  |
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |
| S | S |
| S | S |  |  |  |
| T |  |  |  |  |  |  | T |
|
| S | S | S |
|
|  |  |  |  |
|
|
| S |  |  |  |  |  |  |  |  |  | T | S | B | G | G | G |
|
| B |
| S | S | S | S |
| B |
|
| S |
|
|  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 570 | . | . | . | . | . | . | . | . | . | 580 | . | . | . | . | . | . | . | . | . | 590 | . | . | . | . | . | . | . | . | . | 600 | . | . | . | . | . | . | . | . | . | 610 | . | . | . | . | . | . | . | . | . | 620 | . | . | . | . | . | . | . | . | . | 630 |
Sequence |
G | V | W | L | T | C | K | D | T | F | Y | T | R | D | E | Y | Q | Q | L | L | F | Q | A | L | K | P | D | E | T | G | M | Y | G | R | I | K | T | L | P | P | A | I | Q | R | P | G | I | Y | W | T | G | K | Q | I | I | S | S | V | L | L | N | L | K | P | S | D | R | P | G | L |
Predicted secondary structure |
 |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|  |  |  |
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  | S | T | T |
|
| B |
|  |  |  |  |  |  |  |  |  |  |  |  |
|  |  |  |  |
| S |
|
|
|
|
|
|
|
|
| S | B |
| S | S | S |
| B | B |
|  |  |  |  |  |  |  |  |  |  |  | T |
|
| T | T |
|
|
|
|
  | . | . | . | . | . | . | . | . | . | 640 | . | . | . | . | . | . | . | . | . | 650 | . | . | . | . | . | . | . | . | . | 660 | . | . | . | . | . | . | . | . | . | 670 | . | . | . | . | . | . | . | . | . | 680 | . | . | . | . | . | . | . | . | . | 690 | . | . | . | . | . | . | . | . | . | 700 |
Sequence |
N | L | K | S | K | A | K | V | P | G | K | Y | W | S | P | D | S | E | E | G | S | V | L | F | D | D | G | E | L | L | C | G | I | L | D | K | S | S | F | G | A | S | A | F | G | L | V | H | S | V | H | E | L | Y | G | P | D | I | A | G | R | L | L | S | V | L | S | R | L | F |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |
|
|  |  |  |  |  |  |  |
|  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|  |  |  |  |
| S | S |
| G | G | G | T | S | T | T |
| S |
| S |  |  |  |  |  | T | T |  |  |  |  | S |
|
|
| T | T | T | S | S | S |
| S | S | S |  |  |  |  |  |  |  |  | S |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 710 | . | . | . | . | . | . | . | . | . | 720 | . | . | . | . | . | . | . | . | . | 730 | . | . | . | . | . | . | . | . | . | 740 | . | . | . | . | . | . | . | . | . | 750 | . | . | . | . | . | . | . | . | . | 760 | . | . | . | . | . | . | . | . | . | 770 |
Sequence |
T | A | Y | A | Q | M | R | G | F | T | C | R | M | D | D | L | R | L | D | E | Q | G | D | N | W | R | R | Q | L | L | E | N | G | K | S | F | G | L | E | A | A | S | E | Y | V | G | L | S | T | D | S | P | I | A | L | L | N | A | N | L | E | E | V | Y | R | D | D | E | K | L |
Predicted secondary structure |
 |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  | S |
|
|
|
|
| S | T | T | T | S | B |
|  |  |  |  |  |  |  |  |  |  |  |  |  | G | G | G |  |  |  |  |  |  |  |  |  |  | S |
|
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | S | S |  |  |  |
  | . | . | . | . | . | . | . | . | . | 780 | . | . | . | . | . | . | . | . | . | 790 | . | . | . | . | . | . | . | . | . | 800 | . | . | . | . | . | . | . | . | . | 810 | . | . | . | . | . | . | . | . | . | 820 | . | . | . | . | . | . | . | . | . | 830 | . | . | . | . | . | . | . | . | . | 840 |
Sequence |
Q | G | L | D | A | A | M | K | G | K | M | N | G | L | T | S | S | I | I | N | K | C | I | P | D | G | L | L | T | K | F | P | Y | N | H | M | Q | T | M | T | V | S | G | A | K | G | S | N | V | N | V | S | Q | I | S | C | L | L | G | Q | Q | E | L | E | G | R | R | V | P | L |
Predicted secondary structure |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T | T | B | S | S |
| T | T | T |
|  |  |  |  |  |  |  | T | S | S | S |
|
|  |  |  |  |  |  |  |  | T |
|
|  |  |
|
| S | S | S | S |
| S |
|
|
  | . | . | . | . | . | . | . | . | . | 850 | . | . | . | . | . | . | . | . | . | 860 | . | . | . | . | . | . | . | . | . | 870 | . | . | . | . | . | . | . | . | . | 880 | . | . | . | . | . | . | . | . | . | 890 | . | . | . | . | . | . | . | . | . | 900 | . | . | . | . | . | . | . | . | . | 910 |
Sequence |
M | V | S | G | K | S | L | P | S | F | V | P | Y | E | T | S | A | K | S | G | G | F | I | A | S | R | F | L | T | G | I | A | P | Q | E | Y | Y | F | H | C | M | A | G | R | E | G | L | I | D | T | G | Y | L | Q | R | C | L | M | K | H | L | E | G | L | C | V | Q | Y | D | H |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| T | T |
|
| S | S | T | T | S |
| T | T |
|
| S | G | G | G | T | T |  |  |
|
|
| T | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| G | G | G | G | T | T | T | T | T | T | S |
|
| B |
|
| T | T | S |
  | . | . | . | . | . | . | . | . | . | 920 | . | . | . | . | . | . | . | . | . | 930 | . | . | . | . | . | . | . | . | . | 940 | . | . | . | . | . | . | . | . | . | 950 | . | . | . | . | . | . | . | . | . | 960 | . | . | . | . | . | . | . | . | . | 970 | . | . | . | . | . | . | . | . | . | 980 |
Sequence |
T | V | R | D | S | D | G | S | I | V | Q | F | H | Y | G | E | D | S | L | D | V | T | K | Q | K | H | L | T | Q | F | E | F | S | A | K | N | Y | K | S | L | I | Q | K | Y | K | V | K | S | V | L | S | A | V | D | S | E | T | A | S | S | Y | A | K | K | A | L | K | K | P | Y |
Predicted secondary structure |
 |  |  |
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
|
| B |
| T | T | S |
| B | S |
| S | S | T | T | T | T | T |
| S | G | G | G | G | S | S | T | T |
|  |  |  |  |  |  | S |
|  |  |  |  |  |  | T | T |  |  |  |  |  |  |  | S | B |
|  |  |  |  |  |  |  |  |  |  |  | S | S | S | S |
  | . | . | . | . | . | . | . | . | . | 990 | . | . | . | . | . | . | . | . | . | 1000 | . | . | . | . | . | . | . | . | . | 1010 | . | . | . | . | . | . | . | . | . | 1020 | . | . | . | . | . | . | . | . | . | 1030 | . | . | . | . | . | . | . | . | . | 1040 | . | . | . | . | . | . | . | . | . | 1050 |
Sequence |
K | Y | D | P | V | L | D | K | Y | P | P | S | R | Y | L | G | S | V | S | E | K | F | Q | R | A | V | D | E | Y | T | Q | K | N | P | D | K | L | I | A | E | S | K | L | D | D | S | L | L | N | E | S | K | F | K | A | L | M | Q | L | R | Y | Q | Q | S | L | V | D | P | G | E |
Predicted secondary structure |
|
|
|
|  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
S | S |
|
|  |  |  |  | S |
| T | T | T | B | T | T |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |
|
| S | S | S |
|
|
| G | G | G | T | S | S | S |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  | T | T |
|
|
| T | T |
|
  | . | . | . | . | . | . | . | . | . | 1060 | . | . | . | . | . | . | . | . | . | 1070 | . | . | . | . | . | . | . | . | . | 1080 | . | . | . | . | . | . | . | . | . | 1090 | . | . | . | . | . | . | . | . | . | 1100 | . | . | . | . | . | . | . | . | . | 1110 | . | . | . | . | . | . | . | . | . | 1120 |
Sequence |
S | V | G | V | L | A | S | Q | S | I | G | E | P | S | T | Q | M | T | L | N | T | N | V | T | L | G | I | P | R | L | R | E | I | I | M | T | A | S | A | N | I | Q | T | P | T | M | T | L | R | L | N | D | G | V | S | D | K | R | A | S | A | F | C | K | E | V | N | K | L | V |
Predicted secondary structure |
|
|
|
|
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
B |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
| S |  |  |  |  |  |  |  |  | T | T |
|
| S | S |
| S | S |
|  |  |  |  |  |  |
| T | T |
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|  |  |
  | . | . | . | . | . | . | . | . | . | 1130 | . | . | . | . | . | . | . | . | . | 1140 | . | . | . | . | . | . | . | . | . | 1150 | . | . | . | . | . | . | . | . | . | 1160 | . | . | . | . | . | . | . | . | . | 1170 | . | . | . | . | . | . | . | . | . | 1180 | . | . | . | . | . | . | . | . | . | 1190 |
Sequence |
L | S | E | V | V | R | Q | V | R | V | T | E | K | T | Y | A | I | R | L | D | L | Y | S | R | D | E | Y | Q | D | E | Y | G | V | L | Q | E | E | I | E | S | T | F | S | N | R | F | L | K | I | L | N | R | I | I | K | S | Y | L | A | K | S | K | Q | N | C | K | H | L | D | F |
Predicted secondary structure |
 |  |  |  |  |
|  |  |  |  |  |  |  |
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
G | G | G | G | B |
|
|
|  |  |  |  |
|
|  |  |  |  |  |
| B |
|
|  |  |  |  |  |  | S |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T |
|
|
|
|  |  |  |  |
  | . | . | . | . | . | . | . | . | . | 1200 | . | . | . | . | . | . | . | . | . | 1210 | . | . | . | . | . | . | . | . | . | 1220 | . | . | . | . | . | . | . | . | . | 1230 | . | . | . | . | . | . | . | . | . | 1240 | . | . | . | . | . | . | . | . | . | 1250 | . | . | . | . | . | . | . | . | . | 1260 |
Sequence |
D | Y | V | N | G | E | W | A | T | V | E | L | V | F | P | I | N | T | E | K | L | L | M | V | S | L | V | E | K | A | C | S | E | T | V | I | H | E | I | P | G | I | T | R | C | F | S | K | P | D | T | V | P | K | V | I | T | E | G | V | N | L | K | A | I | W | E | F | Y | N |
Predicted secondary structure |
|
|
|
|
|
|
|
|  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
| T | T | T |
|
|
|  |  |  |  |  |
|
|
| T | T | S |
|
|
|
|  |  |  |  |  |  |  |  |  | T | T |
|  |  |  |
|
| T | T |  |  |  |  |  |  |
|
|
|
|
|
|  |  |  |  |  |  |
|
|  |  |  |  | T | T |
|
| S |
  | . | . | . | . | . | . | . | . | . | 1270 | . | . | . | . | . | . | . | . | . | 1280 | . | . | . | . | . | . | . | . | . | 1290 | . | . | . | . | . | . | . | . | . | 1300 | . | . | . | . | . | . | . | . | . | 1310 | . | . | . | . | . | . | . | . | . | 1320 | . | . | . | . | . | . | . | . | . | 1330 |
Sequence |
E | I | S | M | N | D | I | Y | T | N | D | I | A | A | I | L | R | I | Y | G | V | E | A | A | R | N | A | I | V | H | E | V | S | S | V | F | G | V | Y | G | I | A | V | D | P | R | H | L | S | L | I | A | D | Y | M | T | F | E | G | G | Y | K | A | F | N | R | M | G | I | E |
Predicted secondary structure |
|
|
|
|
|
|  |  |
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
 |  |  |  |  |  |  |  |
|
|
|  |  |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  | T | T | T |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  | T | T | T | S | S |
|
|
| T | T |  |  |  |  | T |
  | . | . | . | . | . | . | . | . | . | 1340 | . | . | . | . | . | . | . | . | . | 1350 | . | . | . | . | . | . | . | . | . | 1360 | . | . | . | . | . | . | . | . | . | 1370 | . | . | . | . | . | . | . | . | . | 1380 | . | . | . | . |
Sequence |
Y | N | T | S | P | F | A | K | M | S | F | E | T | T | C | H | F | L | T | E | A | A | L | R | G | D | V | D | D | L | S | N | P | S | S | R | L | V | V | G | R | V | G | N | F | G | T | G | S | F | D | I | F | T |
Predicted secondary structure |
|
|
|
|  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|  |  |  |  |  |  |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
SS confidence |
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
|
Known secondary structure (DSSP) |
T |
| S |
| T | T |  |  |  |  | T | T |
|  |  |  |  |  |  |  |  |  |  |  |
|
|
| B |
|
|
| S |  |  |  |  |  |  | T | T |
|
|
| S | S | G | G | G | T | S |
|
|
|
|