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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c7alkA_ | 3.00 | PDB header: signaling protein | Chain: A: PDB Molecule: neurogenic locus protein delta; |
Added to library: Sat Aug 7 08:50:30 2021 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | S | G | S | F | E | L | R | L | K | Y | F | S | N | D | H | G | R | D | N | E | G | R | C | C | S | G | E | S | D | G | A | T | G | K | C | L | G | S | C | K | T | R | F | R | V | C | L | K | H | Y | Q | A | T | I | D | T | T | S | Q | C | T | Y | G | D | V | I | T | P | I | L |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | B | T | T | S | S | B | S | S | B | S | S | S | B | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | S | S | S | S | ![]() | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | G | E | N | S | V | N | L | T | Q | N | K | G | F | T | N | P | I | Q | F | P | F | S | F | S | W | P | G | T | F | S | L | I | V | E | A | W | H | D | T | N | N | S | G | N | A | R | T | N | K | L | L | I | Q | R | L | L | V | Q | Q | V | L | E | V | S | S | E | W | K | T | N |
Predicted secondary structure | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | S | S | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | K | S | E | S | Q | Y | T | S | L | E | Y | D | F | R | V | T | C | D | L | N | Y | Y | G | S | G | C | A | K | F | C | R | P | R | D | D | S | F | G | H | S | T | C | S | E | T | G | E | I | I | C | L | T | G | W | Q | G | D | Y | C | H | I | P | K | C | A | K | G | C | E | H |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | T | T | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | S | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | S | S | S | ![]() | ![]() | S | S | S |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . |
Sequence | G | H | C | D | K | P | N | Q | C | V | C | Q | L | G | W | K | G | A | L | C | N | |||||||||||||||||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | S | S | S | S | B | T | T | T | T | T | T |
Download: | PDB structure | FASTA sequence |
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