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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c7a5oA_

Fold library idPDB HeaderMoleculeTitle
c7a5oA_2.95PDB header: structural proteinChain: A: PDB Molecule: mucin-2;


Added to library: Sat Oct 24 09:05:44 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NVCSTWGNFHYKTFDGDVFRFPGLCDYNFASDCRGSYKEFAVHLKRGPGQAEAPAGVESILLTIKDDTIY
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Known secondary structure (DSSP)
TTTTT



S
B

SS



S


SS


TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence LTRHLAVLNGAVVSTPHYSPGLLIEKSDAYTKVYSRAGLTLMWNREDALMLELDTKFRNHTCGLCGDYNG
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Known secondary structure (DSSP)
SS
TT

SSB

TT
SSTTTSSS

GGGTTTB
BTTB

SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence LQSYSEFLSDGVLFSPLEFGNMQKINQPDVVCEDPEEEVAPASCSEHRAECERLLTAEAFADCQDLVPLE
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Known secondary structure (DSSP)
TTSTTTBSSS
B

TTB


SS















TTSSGGGGGGTTTS
S
 .........220.........230.........240.........250.........260.........270.........280
Sequence PYLRACQQDRCRCPGGDTCVCSTVAEFSRQCSHAGGRPGNWRTATLCPKTCPGNLVYLESGSPCMDTCSH
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Known secondary structure (DSSP) SS
SS
SSGGGTT







SSSS



STT

S



SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEVSSLCEEHRMDGCFCPEGTVYDDIGDSGCVPVSQCHCRLHGHLYTPGQEITNDCEQCVCNAGRWVCKD
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Known secondary structure (DSSP)

GGGG






SS



SSSS
SS

GGG

SSS

TT

SS
SSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence LPCPGTCALEGGSHITTFDGKTYTFHGDCYYVLAKGDHNDSYALLGELAPCGSTDKQTCLKTVVLLADKK
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Known secondary structure (DSSP)



TTTTT




SSSSS

SSSTT
TTT
 .........430.........440.........450.........460.........470.........480.........490
Sequence KNAVVFKSDGSVLLNQLQVNLPHVTASFSVFRPSSYHIMVSMAIGVRLQVQLAPVMQLFVTLDQASQGQV
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Known secondary structure (DSSP) TTTS
SSSB

S

SS
SSSSSSS
SSS

GGGTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence QGLCGNFNGLEGDDFKTASGLVEATGAGFANTWKAQSTCHDKLDWLDDPCSLNIESANYAEHWCSLLKKT
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Known secondary structure (DSSP) STT


SS
STTTTB
TTS
B
SSGGGSBSSTT










TTGGGT
S
 .........570.........580.........590.........600.........610.........620.........630
Sequence ETPFGRCHSAVDPAEYYKRCKYDTCNCQNNEDCLCAALSSYARACTAKGVMLWGWREHVCNKDVGSCPNS
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Known secondary structure (DSSP) SSTTGGGTTTT
TTTSSSTTTT


TT

SSSS
SSSTTS
SS
 .........640.........650.........660.........670.........680.........690.........700
Sequence QVFLYNLTTCQQTCRSLSEADSHCLEGFAPVDGCGCPDHTFLDEKGRCVPLAKCSCYGLYLEAGDVVRCV
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Known secondary structure (DSSP)

S
B
TTS

SSSS


S


B



SSS


SSSS


STTS
B



B
TT
B


B
 .........710.........720.........730.........740.........750.........760.........770
Sequence CRDGRLHCRALSCQTLAAGYYHVCPDGLMDDGRGGCVVEKECPCVHNNDLYSSGAKIKVDCNTCTCKRGR
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Known secondary structure (DSSP) B
SSSB





SSSTTT






SS
B

SSSS
B
STT

TT
TT
TTB
SSS
 .........780.........790.........800.........810.........820.........830.........840
Sequence WVCTQAVCHGTCSIYGSGHYITFDGKYYDFDGHCSYVAVQDYCGLGSFSIITENVPCGTTGVTCSKAIKI
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Known secondary structure (DSSP) B







TTT
TT





SS






SSSS
 .........850.........860.........870.........880.........890.........900.........910
Sequence FMGRTELKLEDKHRVVIQRDEGHHVAYTTREVGQYLVVESSTGIIVIWDKRTTVFIKLAPSYKGTVCGLC
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Known secondary structure (DSSP) TTTT


SS



TTTTS
SSS

TT
TT

BSTT
 .........920.........930.........940.........950.........960.........970.........980
Sequence GNFDHRSNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSIC
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Known secondary structure (DSSP)


SS
GGG

B
TTS
B
S
GGGSBS
TTS



S



GGGGGGTTSTTSTTT
 .........990.........1000.........1010.........1020.........1030.........1040.........1050
Sequence HSKVDPKPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDLCPIFCDYYNPPHECEW
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Known secondary structure (DSSP) TTTS

SS

SS

TT






SSSS



GGGSSTT



 .........1060.........1070.........1080.........1090.........1100.........1110.........1120
Sequence HYEPCGNRSFETCRTINGIHSNISVSYLEGCYPRCPKDRPIYEEDLKKCVTADKCGCYVEDTHYPCCLWS
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Known secondary structure (DSSP) TT





BSSGGGT


SS

TT





TTS
TTTT
SSSS



SS






B
 .........1130.........1140.........1150.........1160.........1170.........1180.........1190
Sequence DWINEDHPSSGSDDGDRETFDGVCGAPEDIECRSVKDPHLSLEQHGQKVQCDVSVGFICKNEDQFGNGPF
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Known secondary structure (DSSP)

B



TTSSSSS

TTT
SS
SSSSTT

TTTT



TTTGGGGTTTSSS
 .........1200.....
Sequence GLCYDYKIRVNCCWP
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Known secondary structure (DSSP)









Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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