PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6zyeF_

Fold library id	PDB Header	Molecule	Title
c6zyeF_	4.10	PDB header: membrane protein	Chain: F: PDB Molecule: ynai,low conductance mechanosensitive channel ynai;

Links to external resources
Added to library: Sat Nov 28 08:48:07 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X X G G I G G L A V G M A G K D I L S N F F S G I M L Y F D R P F S I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S
S S
S S
T S
S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D W I R S P D R N I E G T V A E I G W R I T K I T T F D N R P L Y V P N S L F S S I S V E N P G R M T N R R I T T T I G L R Y E D A A K V G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S T T S
G G G G G G S
B
G G G
S
G G G G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V I V E A V R E M L K N H P A I D Q R Q T L L V Y F N Q F A D S S L N I M V Y C F T K T T V W A E W L A A Q Q D V Y L K I I D I V Q S H G A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T B
T T S
T T S
T

. . . . . . . . . 220 . .

Sequence D F A F P S Q T L Y M D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	G	G	I	G	G	L	A	V	G	M	A	G	K	D	I	L	S	N	F	F	S	G	I	M	L	Y	F	D	R	P	F	S	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	S			S	S						S	S																T																S		S			T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	W	I	R	S	P	D	R	N	I	E	G	T	V	A	E	I	G	W	R	I	T	K	I	T	T	F	D	N	R	P	L	Y	V	P	N	S	L	F	S	S	I	S	V	E	N	P	G	R	M	T	N	R	R	I	T	T	T	I	G	L	R	Y	E	D	A	A	K	V	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S											S	S							T	T	S							G	G	G	G	G	G	S			B		G	G	G		S												G	G	G	G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	I	V	E	A	V	R	E	M	L	K	N	H	P	A	I	D	Q	R	Q	T	L	L	V	Y	F	N	Q	F	A	D	S	S	L	N	I	M	V	Y	C	F	T	K	T	T	V	W	A	E	W	L	A	A	Q	Q	D	V	Y	L	K	I	I	D	I	V	Q	S	H	G	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T		T	T	B		T	T	S											T	T											S																										T
	.	.	.	.	.	.	.	.	.	220	.	.
Sequence	D	F	A	F	P	S	Q	T	L	Y	M	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B