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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6z6dA_

Fold library idPDB HeaderMoleculeTitle
c6z6dA_2.20PDB header: viral proteinChain: A: PDB Molecule: terminase large subunit;


Added to library: Sat Jun 12 08:45:19 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MTRGERVIAFIERFCIVPIGQPMRLDPFQKDFILAVYDNPAGTDMAILSIARKNGKTGLIAGILLAHLVG
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Known secondary structure (DSSP)


B



SB



T
TT

S

TTSSTS
 .........80.........90.........100.........110.........120.........130.........140
Sequence PEAVQNTQIVSGALSREQAAIVFNLAVKMVNLNPKLQEIVHITPSGKKLIGLPCNVEYKALSAEGKTTHG
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Known secondary structure (DSSP) TT

SS
SS
TT
SSSSTTTTSSS


S
 .........150.........160.........170.........180.........190.........200.........210
Sequence LSPILAILDETGQVRGPQDDFIDAITTAQGAHENPLLIVISTQAANDADLLSIWIDDAVKSKDPHIVCHV
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Known secondary structure (DSSP)


S
GGG

SS

TTSSS




SSTTS

TT
 .........220.........230.........240.........250.........260.........270.........280
Sequence YEAPKDADISKRESWLAANPALGTFRSEKDMARQAEKAGRMPSFENTFRNLNLNQRVSTVSPFISRSVWE
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Known secondary structure (DSSP)



TTS
TTS
TTBTTTB

GGG


SSS

 .........290.........300.........310.........320.........330.........340.........350
Sequence LCGEMPINTPRKWYAGLDLSARNDLTALVIAGEADDGVWDVFPFFWTPQKTLEERTKTDRAPYDVWVREG
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Known secondary structure (DSSP) TT
S




SS



SSS

SSS
STTTS
TT
 .........360.........370.........380.........390.........400.........410.........420
Sequence LLRTTPGASVDYSFVVADIAEIIGDFDLTSMAFDRWRIDQFRKDADAIGLSLPLVEFGQGFKDMGPAVDT
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Known secondary structure (DSSP) SSSSSS

GGG

TTSTT





S
 .........430.........440.........450.........460.........470.........
Sequence LESLMLNGRVRHGMHPVLTMCAVNAVVVKDAAGNRKLDKSKATGRIDGMVAMTMSVGAA
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Known secondary structure (DSSP) TT

TT


TTS

TTTSSS

T


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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