PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6yxqB_

Fold library id	PDB Header	Molecule	Title
c6yxqB_	2.70	PDB header: structural protein	Chain: B: PDB Molecule: activating signal cointegrator 1 complex subunit 2;

Links to external resources
Added to library: Sat Oct 3 08:43:38 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P A L P L D Q L Q I T H K D P K T G K L R T S P A L H P E Q K A D R Y F V L Y K P P P K D N I P A L V E E Y L E R A T F V A N D L D W L L A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
S S T T
S S
G G G S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L P H D K F W C Q V I F D E T L Q K C L D S Y L R Y V P R K F D E G V A S A P E V V D X Q K R L H R S V F L T F L R X S T H K E S K D H F I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S
T T S
S B S S S S S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence S P S A F G E I L Y N N F L F D I P K I L D L C V L F G K G N S P L L Q K X I G N I F T Q Q P S Y Y S D L D E T L P T I L Q V F S N I L Q H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S S
T T T S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence C G L Q E E R G R L T P S D X P L L E L K D I V L Y L C D T C T T L W A F L D I F P L A C Q T F Q K H D F C Y R L A S F Y E A A I P E X E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T S
G G G T T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence A I K K R R L E D S K L L G D L W Q R L S H S R K K L X E I F H I I L N Q I C L L P I L E S S C D N I Q G F I E E F L Q I F S S L L Q E K R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T
T S
S S
T T T T

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . .

Sequence F L R D Y D A L F P V A E D I S L L Q Q A S S V L D E T R T A Y I L Q A V E S A W E G V D R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	A	L	P	L	D	Q	L	Q	I	T	H	K	D	P	K	T	G	K	L	R	T	S	P	A	L	H	P	E	Q	K	A	D	R	Y	F	V	L	Y	K	P	P	P	K	D	N	I	P	A	L	V	E	E	Y	L	E	R	A	T	F	V	A	N	D	L	D	W	L	L	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G								S	S	T	T							S	S		G	G	G	S													S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	P	H	D	K	F	W	C	Q	V	I	F	D	E	T	L	Q	K	C	L	D	S	Y	L	R	Y	V	P	R	K	F	D	E	G	V	A	S	A	P	E	V	V	D	X	Q	K	R	L	H	R	S	V	F	L	T	F	L	R	X	S	T	H	K	E	S	K	D	H	F	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S																										S			T	T	S																														S	B	S	S	S	S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	S	P	S	A	F	G	E	I	L	Y	N	N	F	L	F	D	I	P	K	I	L	D	L	C	V	L	F	G	K	G	N	S	P	L	L	Q	K	X	I	G	N	I	F	T	Q	Q	P	S	Y	Y	S	D	L	D	E	T	L	P	T	I	L	Q	V	F	S	N	I	L	Q	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S													T	T	T	S																T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	C	G	L	Q	E	E	R	G	R	L	T	P	S	D	X	P	L	L	E	L	K	D	I	V	L	Y	L	C	D	T	C	T	T	L	W	A	F	L	D	I	F	P	L	A	C	Q	T	F	Q	K	H	D	F	C	Y	R	L	A	S	F	Y	E	A	A	I	P	E	X	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T										T	T	T	S																											G	G	G						T	T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	A	I	K	K	R	R	L	E	D	S	K	L	L	G	D	L	W	Q	R	L	S	H	S	R	K	K	L	X	E	I	F	H	I	I	L	N	Q	I	C	L	L	P	I	L	E	S	S	C	D	N	I	Q	G	F	I	E	E	F	L	Q	I	F	S	S	L	L	Q	E	K	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T																															T						S			S	S															T	T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.
Sequence	F	L	R	D	Y	D	A	L	F	P	V	A	E	D	I	S	L	L	Q	Q	A	S	S	V	L	D	E	T	R	T	A	Y	I	L	Q	A	V	E	S	A	W	E	G	V	D	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S														S	S			T																T	S