PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6y6eA_

Fold library id	PDB Header	Molecule	Title
c6y6eA_	2.02	PDB header: rna binding protein	Chain: A: PDB Molecule: upstream of n-ras, isoform a;

Links to external resources
Added to library: Sat Aug 1 08:32:36 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A V D S T V Y K G Q V L K S L D R N D P L P G R I R Y R A L D Y S E V E V P F G D K D Q K G D F T L R H G D W V Q F L L A T D R R D Q L Q R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B
S
S
T T S
G G G B S S S
T T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A T S I A L L D E T F K V S G E K R E Q G T I A S L K E G F G F L R C V E R Q A R L F F H F T E V L D T S R E I D I N D E V E F T V I Q E S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S S S
S S
G G G B S
S S S
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence R L Q A I R I K H L P P N S V Q F E T L V A S N I E G C V T R E A P K S I K S Q D R V E G G V I T Y E H V K K T I M Y F L K D C E K P P R I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
S S S
G G G B S S
T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . .

Sequence G E R V R F D I Y M V K R N K E C I A V N V Q Q V S L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
G G G T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	D	S	T	V	Y	K	G	Q	V	L	K	S	L	D	R	N	D	P	L	P	G	R	I	R	Y	R	A	L	D	Y	S	E	V	E	V	P	F	G	D	K	D	Q	K	G	D	F	T	L	R	H	G	D	W	V	Q	F	L	L	A	T	D	R	R	D	Q	L	Q	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B			S																S									T	T	S									G	G	G	B	S	S	S					T	T											T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	T	S	I	A	L	L	D	E	T	F	K	V	S	G	E	K	R	E	Q	G	T	I	A	S	L	K	E	G	F	G	F	L	R	C	V	E	R	Q	A	R	L	F	F	H	F	T	E	V	L	D	T	S	R	E	I	D	I	N	D	E	V	E	F	T	V	I	Q	E	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T																			S	S							S	S		S	S						G	G	G	B	S		S	S	S				T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	R	L	Q	A	I	R	I	K	H	L	P	P	N	S	V	Q	F	E	T	L	V	A	S	N	I	E	G	C	V	T	R	E	A	P	K	S	I	K	S	Q	D	R	V	E	G	G	V	I	T	Y	E	H	V	K	K	T	I	M	Y	F	L	K	D	C	E	K	P	P	R	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T				S																						S			S	S	S																	G	G	G	B	S	S				T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.
Sequence	G	E	R	V	R	F	D	I	Y	M	V	K	R	N	K	E	C	I	A	V	N	V	Q	Q	V	S	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T											G	G	G	T											S