PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6xz5A_

Fold library id	PDB Header	Molecule	Title
c6xz5A_	2.30	PDB header: dna binding protein	Chain: A: PDB Molecule: uncharacterized protein,rovc,uncharacterized protein;

Links to external resources
Added to library: Sat Sep 19 08:45:35 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K K L Y N D F A W E C L R R N P Q Y I S D W E L F M K N T L T N G G G I P S E L I Q S E L D L N A E K K W G V M K Y I D P Y N S D P T N V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T S S S S
T S B S S
T T
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence W S L K L S N R S V R V K L W G D M S N L P G V K H Q R L L M H D N T L C V K I F S Q N G Y F Q L F I X X X X X X X X X X X X X X X X X X X

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) B
T T T
S S
T
T T
T T S
S S
T T
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence X X X X X X X K E E Q Y L G L L K T I D D R K Q G F S H R D I A S E I F G K E L V K N E W S A D S W V R A K I R Y R I K K A N A L I N Y G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S
T T G G

. . . .

Sequence L N F L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	K	L	Y	N	D	F	A	W	E	C	L	R	R	N	P	Q	Y	I	S	D	W	E	L	F	M	K	N	T	L	T	N	G	G	G	I	P	S	E	L	I	Q	S	E	L	D	L	N	A	E	K	K	W	G	V	M	K	Y	I	D	P	Y	N	S	D	P	T	N	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													T	T																	T	S	S	S	S																		T	S	B	S	S				T	T					T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	W	S	L	K	L	S	N	R	S	V	R	V	K	L	W	G	D	M	S	N	L	P	G	V	K	H	Q	R	L	L	M	H	D	N	T	L	C	V	K	I	F	S	Q	N	G	Y	F	Q	L	F	I	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X	X
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	B		T	T	T		S	S												T		T	T									T	T	S									S	S																	T	T		G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	X	X	X	X	X	X	X	K	E	E	Q	Y	L	G	L	L	K	T	I	D	D	R	K	Q	G	F	S	H	R	D	I	A	S	E	I	F	G	K	E	L	V	K	N	E	W	S	A	D	S	W	V	R	A	K	I	R	Y	R	I	K	K	A	N	A	L	I	N	Y	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								T	T																						S	S																			T	T	G	G
	.	.	.	.
Sequence	L	N	F	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G