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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6xn7J_

Fold library idPDB HeaderMoleculeTitle
c6xn7J_3.47PDB header: rna binding protein/rnaChain: J: PDB Molecule: crispr-associated protein csm5;


Added to library: Sat Jan 15 08:36:25 2022
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MKKTYRVTLTALGPIFIGGGEKLKKYEYIFDKQKKVAHMIDHTKFTKYLLEKNLLDDFTSRVNSHFDLYD
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Known secondary structure (DSSP)




SS





S

SSSS
TT
BB
SSS
STT

SS
 .........80.........90.........100.........110.........120.........130.........140
Sequence YLVNKKGIVFMPLVKYSVPVAQFMNDLNTFVKDAFGRPYIPGSSLKGALRTAILNDLKEDTKENEVFAHL
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Known secondary structure (DSSP) GGGTSSS





BS


B









B
TT

B


TTS
S


TT
SSTTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence QVSDSETIDLENLKVYQKVDYSKTAKPLPLYRECLKPNTEITFTVSFDDEYLTLKKIQNALHKTYQHYYI
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Known secondary structure (DSSP)






TTSSSS
SS



TTT

T
 .........220.........230.........240.........250.........260.........270.........280
Sequence KWLKGGKVGETLIKGVTFALDQPSQNQGEIIYIGGGAGFVSKTLHYKSKNRDQARNDSFDILKQLFRTTY
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Known secondary structure (DSSP) TTTSTTTSSS

TTT


S

SSS
SSS


B

SS





TT
SSS



 .........290.........300.........
Sequence SKMRSVPDNVPTGKHYLEMGKARIKLEEL
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Known secondary structure (DSSP) S


B
B







BTTB




Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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London
Michael Sternberg

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