PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6whaA_

Fold library id	PDB Header	Molecule	Title
c6whaA_	3.36	PDB header: membrane protein/immune system	Chain: A: PDB Molecule: soluble cytochrome b562,5-hydroxytryptamine receptor 2a

Links to external resources
Added to library: Sat Sep 26 09:34:14 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence V I I L T I A G N I L V I M A V L Q N A T N Y F L M S L A I A D M L L G F L V M P V S M L T I L Y G Y R W P S K L C A V W I Y L D V L F S T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A S I M H L C A I S L D R Y V A I Q N P I H H S R F N S R T K A F L K I I A V W T I S V G I S M P I P V F G L Q D D S K V F K G S C L L A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence D N F V L I G S F V S F F I P L T I M V I T Y F L T I K S L Q I S N E Q K A C K V L G I V F F L F V V M W C P F F I T N I M A V N E D V I G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . .

Sequence A L L N V F V W I G Y L S S A V N P L V Y T L F N K T Y R S A F S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	V	I	I	L	T	I	A	G	N	I	L	V	I	M	A	V	L	Q	N	A	T	N	Y	F	L	M	S	L	A	I	A	D	M	L	L	G	F	L	V	M	P	V	S	M	L	T	I	L	Y	G	Y	R	W	P	S	K	L	C	A	V	W	I	Y	L	D	V	L	F	S	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S	S																												T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	S	I	M	H	L	C	A	I	S	L	D	R	Y	V	A	I	Q	N	P	I	H	H	S	R	F	N	S	R	T	K	A	F	L	K	I	I	A	V	W	T	I	S	V	G	I	S	M	P	I	P	V	F	G	L	Q	D	D	S	K	V	F	K	G	S	C	L	L	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S						S			S																			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	N	F	V	L	I	G	S	F	V	S	F	F	I	P	L	T	I	M	V	I	T	Y	F	L	T	I	K	S	L	Q	I	S	N	E	Q	K	A	C	K	V	L	G	I	V	F	F	L	F	V	V	M	W	C	P	F	F	I	T	N	I	M	A	V	N	E	D	V	I	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)													S	S																T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.
Sequence	A	L	L	N	V	F	V	W	I	G	Y	L	S	S	A	V	N	P	L	V	Y	T	L	F	N	K	T	Y	R	S	A	F	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																							S	S	S