PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6vs4B_

Fold library id	PDB Header	Molecule	Title
c6vs4B_	2.40	PDB header: hydrolase	Chain: B: PDB Molecule: small copii coat gtpase sar1;

Links to external resources
Added to library: Sat Mar 14 08:48:03 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G P G S M L D N I Q E Y L G V V K A K L T E F Y E K V F Q N F V K S L F G K P S S I L F L G I D N A G K T T L V N K L K S D S T D V Y M P T

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S S S
T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence H H P S T S Y I E I G N L K A Q V I D L G G H T A A R L A W R D Y F Y D C H G I V F I V D V H D V E R F Q E V R E A Y E T V L S L E K R A P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S T T T T
S
S
T T T T G G G G T T
S S
G G G
S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V V V L M N K I D L E G H T P E T A E A D Y Q W K S W L S Q E T G I E N Q E D P E R G Q V V K I F Y V T I T S G S A N S I T G P L A R A F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G G T
B
G G G S S
T T S G G G G
T T S

. . . . . . . . . 220 . . .

Sequence W L E A M I T Y N N K K E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	P	G	S	M	L	D	N	I	Q	E	Y	L	G	V	V	K	A	K	L	T	E	F	Y	E	K	V	F	Q	N	F	V	K	S	L	F	G	K	P	S	S	I	L	F	L	G	I	D	N	A	G	K	T	T	L	V	N	K	L	K	S	D	S	T	D	V	Y	M	P	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																					S	S										T	T	S	S									S		T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	H	H	P	S	T	S	Y	I	E	I	G	N	L	K	A	Q	V	I	D	L	G	G	H	T	A	A	R	L	A	W	R	D	Y	F	Y	D	C	H	G	I	V	F	I	V	D	V	H	D	V	E	R	F	Q	E	V	R	E	A	Y	E	T	V	L	S	L	E	K	R	A	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	T	T							T	T										S			S		T	T	T	T	G	G	G	G	T	T										S	S		G	G	G																S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	V	V	L	M	N	K	I	D	L	E	G	H	T	P	E	T	A	E	A	D	Y	Q	W	K	S	W	L	S	Q	E	T	G	I	E	N	Q	E	D	P	E	R	G	Q	V	V	K	I	F	Y	V	T	I	T	S	G	S	A	N	S	I	T	G	P	L	A	R	A	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G	G	T																									B			G	G	G	S	S									T	T	S	G	G	G	G		T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	W	L	E	A	M	I	T	Y	N	N	K	K	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)