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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6vr7A_

Fold library idPDB HeaderMoleculeTitle
c6vr7A_2.50PDB header: ligaseChain: A: PDB Molecule: mur ligase middle domain protein;


Added to library: Sat Feb 13 09:24:17 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NKKIVVIGGCGTVGSLMARILKSKGNDVTVSDIRKDTYLKDIFKSEGIKLDLGGHDLSLIKKADAIAIAP
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Known secondary structure (DSSP)

TTTSTTS

S



STTT

SS


S
G
 .........80.........90.........100.........110.........120.........130.........140
Sequence SLTNNKKVLNLINKNPKAELIKIEDILKYKVKKPVVGITGTNGKTTTREMLKNILKISGLEVPEHHLNIN
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Known secondary structure (DSSP) GGTT
TTSTTS
S


S
SSS
TT










 .........150.........160.........170.........180.........190.........200.........210
Sequence TEFIPPLQARLPGDVAVVEIGTFGVKNEIKRSAKNSNVTVGVITNISRDHLKNISFQEYVECKKEITEVA
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Known secondary structure (DSSP)
TTTTSSSS



SS
TTTT
S



S
S
SSS
GGGGGT
 .........220.........230.........240.........250.........260.........270.........280
Sequence KKLVLNADDPIVASFGNDNTVYYGIENLKIKIKHFFEDRDCPFCGKNLKYEEIFLGHLGKYECECGFKRP
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Known secondary structure (DSSP) STTSTT

SS

BSS








B
TTT
SB
TT
TTS
B

 .........290.........300.........310.........320.........330.........340.........350
Sequence RPTVKAIDVENKKFILSIDSNEGLVKLEYGGIFNVYNALAAAAAAFILKIDFDKIIEGLNTFKKVPGRME
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Known secondary structure (DSSP)

SSB
SS
TT

SS
STT

T



TTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence KIYKKPEIIIDYAHNVAGVKAILQTIKPKGRLIVVNTISSESGIKEDIKIAKILSSADILIPASYSARKA
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Known secondary structure (DSSP) TT


S


SS




TT
GGGSS
S
 .........430.........440.........450.........460.........470.........480......
Sequence SKYTNTTVINVKSTEKKFKKGTLGASKFQVEEAIKKALSYADKNDTILIIGEGGVKYGREIIEKIK
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Known secondary structure (DSSP) TTS
S


GGGT


SSS






TT
SSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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