PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6vq7J_

Fold library id	PDB Header	Molecule	Title
c6vq7J_	4.00	PDB header: proton transport	Chain: J: PDB Molecule: v-type proton atpase subunit e 1;

Links to external resources
Added to library: Sat Mar 21 08:45:07 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A L S D A D V Q K Q I K H M M A F I E Q E A N E K A E E I D A K A E E E F N I E K G R L V Q T Q R L K I M E Y Y E K K E K Q I E Q Q K K I Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M S N L M N Q A R L K V L R A R D D L I T D L L N E A K Q R L S K V V K D T T R Y Q V L L D G L V L Q G L Y Q L L E P R M I V R C R K Q D F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
G G G

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence P L V K A A V Q K A I P M Y K I A T K K D V D V Q I D L E A Y L P E D I A G G V E I Y N G D R K I K V S N T L E S R L D L I A Q Q M M P E V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S
T T
S
T T S S S

. . . . . . . . . 220 . . . . .

Sequence R G A L F G A N A N R K F L D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	L	S	D	A	D	V	Q	K	Q	I	K	H	M	M	A	F	I	E	Q	E	A	N	E	K	A	E	E	I	D	A	K	A	E	E	E	F	N	I	E	K	G	R	L	V	Q	T	Q	R	L	K	I	M	E	Y	Y	E	K	K	E	K	Q	I	E	Q	Q	K	K	I	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	S	N	L	M	N	Q	A	R	L	K	V	L	R	A	R	D	D	L	I	T	D	L	L	N	E	A	K	Q	R	L	S	K	V	V	K	D	T	T	R	Y	Q	V	L	L	D	G	L	V	L	Q	G	L	Y	Q	L	L	E	P	R	M	I	V	R	C	R	K	Q	D	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																				T																							S								G	G	G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	V	K	A	A	V	Q	K	A	I	P	M	Y	K	I	A	T	K	K	D	V	D	V	Q	I	D	L	E	A	Y	L	P	E	D	I	A	G	G	V	E	I	Y	N	G	D	R	K	I	K	V	S	N	T	L	E	S	R	L	D	L	I	A	Q	Q	M	M	P	E	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T										S	S					T	T			S							T	T	S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.
Sequence	R	G	A	L	F	G	A	N	A	N	R	K	F	L	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T