PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6vq7H_

Fold library id	PDB Header	Molecule	Title
c6vq7H_	4.00	PDB header: proton transport	Chain: H: PDB Molecule: atpase h+-transporting v1 subunit d;

Links to external resources
Added to library: Sat Mar 21 08:49:17 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K D R I E I F P S R M A Q T I M K A R L K G A Q T G R N L L K K K S D A L T L R F R Q I L K K I I E T K M L M G E V M R E A A F S L A E A K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence F T A G D F S T T V I Q N V N K A Q V K I R A K K D N V A G V T L P V F E H Y H E G T D S Y E L T G L A R G G E Q L A K L K R N Y A K A V E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S
S
S S S
T T T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence L L V E L A S L Q T S F V T L D E A I K I T N R R V N A I E H V I I P R I E R T L A Y I I T E L D E R E R E E F Y R L K K I Q E K K K I I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

. . . .

Sequence E K S E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	D	R	I	E	I	F	P	S	R	M	A	Q	T	I	M	K	A	R	L	K	G	A	Q	T	G	R	N	L	L	K	K	K	S	D	A	L	T	L	R	F	R	Q	I	L	K	K	I	I	E	T	K	M	L	M	G	E	V	M	R	E	A	A	F	S	L	A	E	A	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S					S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	F	T	A	G	D	F	S	T	T	V	I	Q	N	V	N	K	A	Q	V	K	I	R	A	K	K	D	N	V	A	G	V	T	L	P	V	F	E	H	Y	H	E	G	T	D	S	Y	E	L	T	G	L	A	R	G	G	E	Q	L	A	K	L	K	R	N	Y	A	K	A	V	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S								S					S											S	S	S																			T	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	L	V	E	L	A	S	L	Q	T	S	F	V	T	L	D	E	A	I	K	I	T	N	R	R	V	N	A	I	E	H	V	I	I	P	R	I	E	R	T	L	A	Y	I	I	T	E	L	D	E	R	E	R	E	E	F	Y	R	L	K	K	I	Q	E	K	K	K	I	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																T
	.	.	.	.
Sequence	E	K	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T