Fold library entry viewer: c6vdeA_

Added to library: Sat Feb 15 08:45:13 2020
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	T	P	T	L	M	L	L	D	G	N	S	L	A	F	R	A	F	Y	A	L	P	A	E	N	F	K	T	Q	S	G	L	T	T	N	A	V	Y	G	F	T	A	M	L	I	N	L	L	R	D	E	Q	P	T	H	I	A	A	A	F	D	V	A	T	P	D	E	F	R	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			T	T	S		T	T	T	T	B		T	T	S		B																		T			S												G	G	G	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	I	D	I	T	K	E	V	L	G	A	L	G	I	T	V	L	A	E	P	G	F	E	A	D	D	I	I	A	T	L	A	T	Q	A	E	Q	E	G	Y	R	V	L	V	V	T	G	D	R	D	S	L	Q	L	V	S	D	Q	V	T	V	L	Y	P	R	K	G	V	S	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T							T	T	S																T	T								S	S	T	T	T	T	S	S		B	T	T							S	T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	L	T	R	F	T	P	D	A	V	V	E	K	Y	G	L	T	P	Q	Q	Y	P	D	F	A	A	L	R	G	E	K	T	A	T	K	W	I	V	E	Y	G	S	L	Q	A	L	V	D	N	V	D	A	V	K	G	K	V	G	D	A	L	R	A	N	L	S	S	V	I	L	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														S	S		G	G	G					G	G	G	T				S	G	G	G	G	G	T	S	S			S	T	T	T	S	S	S		G	G	G	T	T	T	T	T	T	T	S	S	T	T	T	T	T	S	S	T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	R	E	L	T	D	L	I	R	D	V	P	L	P	Q	T	P	D	T	L	R	M	Q	P	W	N	R	D	Q	I	H	R	L	F	D	D	L	E	F	R	V	L	R	D	R	L	F	E	T	L	V	A	V	E	P	E	V	E	H	G	F	D	V	R	G	R	A	L	E	P	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	T	T				S					S			T	T	T		B						T	T	T								T	T	T																	S	S	S												T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	E	L	A	A	W	L	S	E	H	S	L	G	S	R	F	G	V	A	V	V	G	T	H	K	A	Y	D	A	D	A	T	A	L	A	I	V	A	A	D	G	D	G	R	Y	I	D	T	S	T	L	T	P	E	D	E	A	A	L	A	S	W	L	A	D	P	G	P	P	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T	S	S												S	S	S											T	T	S							S	T	T																S	S	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	L	H	E	A	K	L	A	M	H	D	L	A	G	R	G	W	T	L	R	G	V	T	S	D	T	A	L	A	A	Y	L	V	R	P	G	Q	R	S	F	T	L	D	D	L	A	V	R	Y	L	H	R	E	L	R	A	E	T	P	E	Q	Q	Q	L	S	L	L	D	D	S	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S											T	T																			T	T														T	S			S	S		S	S	T	T	G	G	G	G	S	S	S				S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	G	V	D	E	Q	A	V	Q	T	V	I	L	R	A	C	A	V	L	D	L	A	D	A	L	D	Q	E	L	A	R	I	D	S	L	S	L	L	S	R	M	E	L	P	V	Q	R	T	L	A	E	M	E	H	A	G	I	A	V	D	L	G	M	L	E	Q	L	Q	S	E	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S																													T	T								T																		B
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	A	D	Q	I	R	D	A	A	E	A	A	Y	S	V	I	G	K	Q	I	N	L	G	S	P	K	Q	L	Q	A	V	L	F	D	E	L	E	M	P	K	T	K	K	T	K	T	G	Y	T	T	D	A	D	A	L	Q	S	L	F	E	K	T	G	H	P	F	L	Q	H	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S	S				T	T										T	T	T	S						S	B		S	S	S	B			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	A	H	R	D	A	T	R	L	K	V	T	V	D	G	L	L	N	S	V	A	S	D	G	R	I	H	T	T	F	N	Q	T	I	A	A	T	G	R	L	S	S	T	E	P	N	L	Q	N	I	P	I	R	T	E	A	G	R	R	I	R	D	A	F	V	V	G	E	G	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	B		T	T	S								S	S	S	S	T	T							S	S		G	G	G	S		S	S	S	T	T					G	G	G	B	B			T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	E	L	M	T	A	D	Y	S	Q	I	E	M	R	I	M	A	H	L	S	R	D	A	G	L	I	E	A	F	N	T	G	E	D	L	H	S	F	V	A	S	R	A	F	S	V	P	I	D	E	V	T	P	E	L	R	R	R	V	K	A	M	S	Y	G	L	A	Y	G	L	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S											T										T	S	S									T	T	T	S		T	T	S				T	T												T	T	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	A	Y	G	L	A	Q	Q	L	K	I	S	T	E	E	A	K	V	Q	M	E	Q	Y	F	D	R	F	G	G	V	R	D	Y	L	R	D	V	V	D	Q	A	R	K	D	G	Y	T	S	T	V	L	G	R	R	R	Y	L	P	E	L	D	S	S	N	R	Q	V	R	E	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S															T	T			T														T	T	S					T	T							S		S	S			S	S	S	T	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	E	R	A	A	L	N	A	P	I	Q	G	S	A	A	D	I	I	K	V	A	M	I	N	V	D	Q	A	I	K	D	A	G	L	R	S	R	I	L	L	Q	V	H	D	E	L	L	F	E	V	S	E	G	E	Q	G	E	L	E	Q	L	V	R	E	H	M	G	N	A	Y	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	T	T	T																							T		S								T	T								T	T															T	S	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860
Sequence	L	D	V	P	L	E	V	S	V	G	Y	G	R	S	W	D	A	A	A	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S										S	B

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PDB structure

FASTA sequence

Hidden Markov model

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