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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c6u8yN_ | 4.00 | PDB header: membrane protein | Chain: N: PDB Molecule: nadh dehydrogenase subunit i; |
Added to library: Sat Sep 12 08:40:21 2020 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | F | R | I | A | P | E | E | K | V | K | K | K | P | S | F | L | K | P | W | F | G | L | K | Y | L | F | K | K | P | V | T | I | K | I | P | Y | E | F | I | E | P | A | P | R | Y | R | G | F | H | T | L | D | W | K | K | C | I | G | C | N | M | C | G | Q | I | C | P | A | R | A |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | S | S | S | G | G | G | G | G | G | G | G | S | S | T | T | T | T | T | ![]() | ![]() | ![]() | ![]() | T | T | T | T | G | G | G | T | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | I | E | M | T | W | I | P | H | P | K | I | D | Y | G | R | C | T | F | C | Q | F | C | V | D | V | C | P | T | G | A | L | G | F | I | E | T | Y | M | L | T | T | T | W | R | E | E | E | L | L | L | Y | D | W | V | P | I | E | P | E | K | F | K | E | I | Q | E | K | F | K | D |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | B | B | S | S | S | T | T | T | T | T | S | S | ![]() | ![]() | ![]() | ![]() | S | B | S | S | G | G | G | T | G | G | G | G | G | G | G | G | G | T | S | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . |
Sequence | Y | K | F | P | V | E | K | I | E | F | N | K | E | T | K | E | V | T | Y | Y | L | R | D | G | T | T | F | K | F | K | I | L | G | Y | G | L | ||||||||||||||||||||||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | T | T | B | S | S | S | ![]() | ![]() | ![]() | B | S | S | S | ![]() | ![]() | ![]() | B |
Download: | PDB structure | FASTA sequence |
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