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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6tv9E_

Fold library idPDB HeaderMoleculeTitle
c6tv9E_1.89PDB header: unknown functionChain: E: PDB Molecule: protein nirf,protein nirf;


Added to library: Sat Apr 25 08:42:58 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PPLRGSGDLGVLIERADGSVQILDGTAKTSLARVEGLGDLSHASLVFSRDQRYAYVFGRDGGLTKLDLLA
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Known secondary structure (DSSP)




STTTTTTTTTT





SS
TTSSTTSTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence QRIDKRLIQGGNSIGGAISQDGRLVAVSNYEPGGVKVFDSRTLELVAEIPATRLPGQDRNSRVVGLVDAP
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Known secondary structure (DSSP) T
TTB
S


TTSSTTTTTTT



B
TTSSSB

T
 .........150.........160.........170.........180.........190.........200.........210
Sequence GQRFVFSLFDSGEIWIADFSQGDTPHLTRFRDIGKQPYDALISPDGRYYMAGLFGEDGMAQLDLWHPERG
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Known secondary structure (DSSP) TTTTTT
TTSSS




S

TTS
SSSSSTT
GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence VRRVLGDYGRGQRKLPVYKMPHLEGWTIASDQAFVPAVGHHQVLVLDARDWKQTDAIDVAGQPVFVMTRP
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Known secondary structure (DSSP)
TT
S
TTS


GGGS

GGG

SS
SSSSTTTT
SS

T
 .........290.........300.........310.........320.........330.........340.........350
Sequence DDRQIWVNFAYPDNDKVQVIDSETHEVIETLRPGPGVLHMEFSGRGDQVWISVRDADQLQVWDPYRLKRI
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Known secondary structure (DSSP) TSS
TTSTT
TTT




S

SSSS
GGGTTTTT
 .........360.........370..
Sequence GSLPARSPSGIFFSHRAQHIGL
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Known secondary structure (DSSP)
SSGGGGGSTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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