PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6tmfI_

Fold library id	PDB Header	Molecule	Title
c6tmfI_	2.80	PDB header: ribosome	Chain: I: PDB Molecule: 30s ribosomal protein s7;

Links to external resources
Added to library: Sat Feb 15 08:34:33 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A K A L T E R F Y Q P K E L K V M G R W S V E D V T V N D P S L R P Y I N L E A R L L P H S H G R H A K K A F G K A N V H I V E R L I N K V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S T T T S
S
B T T T B
S T T
T T T G G G S B
S
S T T T T S S S S B

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence M R S G A S S H K A G G H F M R R E H R S L M S K K M K A Y E V V K E A F M I I E R R T K Q N P I Q V L V R A I E N S A P R E D T T T I A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S S
B T T B
S S S
T T
S T T S
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G G I R Y H M A V D V S P L R R L D I A L K N I A L G A S A K C Y R N K T S Y A Q A L A E E I I A A A N A D P K S F A Y S R K E E I E R I A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
T T S S S
T
T T S

. . . .

Sequence Q S S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	K	A	L	T	E	R	F	Y	Q	P	K	E	L	K	V	M	G	R	W	S	V	E	D	V	T	V	N	D	P	S	L	R	P	Y	I	N	L	E	A	R	L	L	P	H	S	H	G	R	H	A	K	K	A	F	G	K	A	N	V	H	I	V	E	R	L	I	N	K	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	S	T	T	T	S					S			B	T	T	T	B		S	T	T						T	T	T	G	G	G	S	B					S						S	T	T	T	T	S	S	S					S	B
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	R	S	G	A	S	S	H	K	A	G	G	H	F	M	R	R	E	H	R	S	L	M	S	K	K	M	K	A	Y	E	V	V	K	E	A	F	M	I	I	E	R	R	T	K	Q	N	P	I	Q	V	L	V	R	A	I	E	N	S	A	P	R	E	D	T	T	T	I	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S					S	S	S		B	T	T	B						S	S	S		T	T																			S	T	T	S												T	T			S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	G	I	R	Y	H	M	A	V	D	V	S	P	L	R	R	L	D	I	A	L	K	N	I	A	L	G	A	S	A	K	C	Y	R	N	K	T	S	Y	A	Q	A	L	A	E	E	I	I	A	A	A	N	A	D	P	K	S	F	A	Y	S	R	K	E	E	I	E	R	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T																															T	T	S	S	S																T		T	T	S
	.	.	.	.
Sequence	Q	S	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)