Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6thkA_

Fold library idPDB HeaderMoleculeTitle
c6thkA_2.20PDB header: antimicrobial proteinChain: A: PDB Molecule: pyocin s5;


Added to library: Sat Mar 7 08:32:16 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GDLIQREIYLQKNIYYPVRSIFEQGTKEKKEINKKVSDQVDGLLKQITQGKREATRQERVDVMSAVLHKM
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)

TTTSS


 .........80.........90.........100.........110.........120.........130.........140
Sequence ESDLEGYKKTFTKGPFIDYEKQSSLSIYEAWVKIWEKNSWEERKKYPFQQLVRDELERAVAYYKQDSLSE
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TS



GGGS
TS
S
 .........150.........160.........170.........180.........190.........200.........210
Sequence AVKVLRQELNKQKALKEKEDLSQLERDYRTRKANLQMKVQSELDQAGSALPPLVSPTPEQWLERATRLVT
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) TTS


SS

 .........220.........230.........240.........250.........260.........270.........280
Sequence QAIADKKQLQTTNNTLIKNSPTPLEKQKAIYNGELLVDEIASLQARLVKLNAETTRRRTEAERKAAEEQA
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP) T
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence LQDAIKFTADFYKEVTEKFGARTSEMARQLAEGARGKNIRSSAEAIKSFEKHKDALNKKLSLKDRQAIAK
Predicted secondary structure
SS confidence





































































Known secondary structure (DSSP)
TT
B


S
 .........360.........370.........380.........390.........400.........410.........420
Sequence AFDSLDKQMMAKSLEKFSKGFGVVGKAIDAASLYQEFKISTETGDWKPFFVKIETLAAGAAASWLVGIAF
Predicted secondary structure




SS confidence





































































Known secondary structure (DSSP) T

TT






SS

TT
B
 .........430.........440.........450.........460......
Sequence ATATATPIGILGFALVMAVTGAMIDEDLLEKANNLVISILEHHHHH
Predicted secondary structure



SS confidence













































Known secondary structure (DSSP) S

TT








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions