Fold library entry viewer: c6sliB_

Added to library: Sat May 23 11:17:55 2020
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	S	T	V	S	G	S	V	A	K	V	S	S	E	K	L	A	E	K	P	V	A	N	I	M	D	A	L	Q	G	Q	V	A	G	M	Q	V	M	T	T	S	G	D	P	T	A	V	A	S	V	E	I	H	G	T	G	S	L	G	A	S	S	A	P	L	Y	I	V	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	S							G	G	G	S	S			S	S	S		G	G	G	G	G	T	T		S	T	T										T	T								S	S				S	S	S									T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	M	Q	T	S	L	D	V	V	A	T	M	N	P	N	D	F	E	S	M	S	V	L	K	D	A	S	A	T	S	I	Y	G	A	R	A	A	N	G	V	V	F	I	Q	T	K	K	G	K	M	S	E	R	G	R	I	T	F	N	A	S	Y	G	I	S	Q	I	L	N	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	S		G	G	G									S	T	T	T	S	S	S			S	S	G	G	G														S	S															S			G
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	P	L	D	N	M	M	T	G	D	E	L	L	D	F	Q	V	K	A	G	F	W	G	N	N	Q	T	V	Q	K	V	K	D	M	I	L	A	G	A	E	D	L	Y	G	N	Y	D	S	L	K	D	E	Y	G	K	T	L	F	P	V	D	F	N	H	D	A	D	W	L	K	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	G	G	G	S	B													T	T	S	S		S	S			T	T					T	T	T	T	T	T					T	T	S	T	T	T	T	T	T	B	T	T	T	B		S	B		S	S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	F	K	T	A	P	T	S	Q	G	D	I	S	F	S	G	G	S	Q	G	T	S	Y	Y	A	S	I	G	Y	F	D	Q	E	G	M	A	R	E	P	A	N	F	K	R	Y	S	G	R	L	N	F	E	S	R	I	N	E	W	L	K	V	G	A	N	L	S	G	A	I	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B																	S	S															S	B	S	S																		S	S	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	N	R	R	S	A	D	Y	F	G	K	Y	Y	M	G	S	G	T	F	G	V	L	T	M	P	R	Y	Y	N	P	F	D	V	N	G	D	L	A	D	V	Y	Y	M	Y	G	A	T	R	P	S	M	T	E	P	Y	F	A	K	M	R	P	F	S	S	E	S	H	Q	A	N	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	S			T	T		S							S		T	T	B			B		T	T	S		B		S					S	S		S	S											T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	N	G	F	A	Q	I	T	P	I	K	G	L	T	L	K	A	Q	A	G	V	D	I	T	N	T	R	T	S	S	K	R	M	P	N	N	P	Y	D	S	T	P	L	G	E	R	R	E	R	A	Y	R	D	V	S	K	S	F	T	N	T	A	E	Y	K	F	S	I	D	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	T	T																						T	T		T	T	S	S		S																										S	S	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	H	D	L	T	A	L	M	G	H	E	Y	I	E	Y	E	G	D	V	I	G	A	S	S	K	G	F	E	S	D	K	L	M	L	L	S	Q	G	K	T	G	N	S	L	S	L	P	E	H	R	V	A	E	Y	A	Y	L	S	F	F	S	R	F	N	Y	G	F	D	K	W	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																													T	T				T	T	S				S	T	T																									T	T	T
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	Y	I	D	F	S	V	R	N	D	Q	S	S	R	F	G	S	N	N	R	S	A	W	F	Y	S	V	G	G	M	F	D	I	Y	N	K	F	I	Q	E	S	N	W	L	S	D	L	R	L	K	M	S	Y	G	T	T	G	N	S	E	I	G	N	Y	N	H	Q	A	L	V	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S		T	T	S			B											T	T	T	T	T	T				S	S															B			S		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	N	N	Y	T	E	D	A	M	G	L	S	I	S	T	A	G	N	P	D	L	S	W	E	K	Q	S	Q	F	N	F	G	L	A	A	G	A	F	N	N	R	L	S	A	E	V	D	F	Y	V	R	T	T	N	D	M	L	I	D	V	P	M	P	Y	I	S	G	F	F	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	S	S											T	T				B														T	T	S		S													S									G	G	G	S		S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Q	Y	Q	N	V	G	S	M	K	N	T	G	V	D	L	S	L	K	G	T	I	Y	Q	N	K	D	W	N	V	Y	A	S	A	N	F	N	Y	N	R	Q	E	I	T	K	L	F	F	G	L	N	K	Y	M	L	P	N	T	G	T	I	W	E	I	G	Y	P	N	S	F	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S	S																				S	S	S		S					T	T	T	T					S	S	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	M	A	E	Y	A	G	I	D	K	K	T	G	K	Q	L	W	Y	V	P	G	Q	V	D	A	K	V	T	T	S	Q	Y	S	A	D	L	E	T	R	I	D	K	S	V	T	P	P	I	T	G	G	F	S	L	G	A	S	W	K	G	L	S	L	D	A	D	F	A	Y	I	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									T	T	T								T	T									S	S			G	G	G					S			S	S		S											S	S	S	B
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	G	K	W	M	I	N	N	D	R	Y	F	T	E	N	G	G	G	L	M	Q	L	N	K	D	K	M	L	L	N	A	W	T	E	D	N	K	E	T	D	V	P	K	L	G	Q	S	P	Q	F	D	T	H	L	L	E	N	A	S	F	L	R	L	K	N	L	K	L	T	Y	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T		S	S	S		T	T	S			B	G	G	G	G	G				S	S			S	S	S	S			T	T					S	S	S	S	S																B
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900
Sequence	L	P	N	S	L	F	A	G	Q	N	V	I	G	G	A	R	V	Y	L	M	A	R	N	L	L	T	V	T	K	Y	K	G	F	D	P	E	A	G	G	N	V	G	K	N	Q	Y	P	N	S	K	Q	Y	V	A	G	I	Q	L	S	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			G	G	G		S	S		T	T																			S	S	S	S		T	T	S		S					S

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PDB structure

FASTA sequence

Hidden Markov model

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