PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6sdvB_

Fold library id	PDB Header	Molecule	Title
c6sdvB_	1.90	PDB header: electron transport	Chain: B: PDB Molecule: formate dehydrogenase, beta subunit, putative;

Links to external resources
Added to library: Sat Mar 14 08:27:06 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G K M F F V D L S R C T A C R G C Q I A C K Q W K N L P A E E T R N T G S H Q N P P D L S Y V T L K T V R F T E K S R K G P G I D W L F F P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
G G G
T
S S S S
S S S
B T T B S
S S S S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence E Q C R H C V E P P C K G Q A D V D L E G A V V K D E T T G A V L F T E L T A K V D G E S V R S A C P Y D I P R I D P V T K R L S K C D M C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T S
T T T
G G G G G S
T T
T T T
T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N D R V Q N G L L P A C V K T C P T G T M N F G D E Q E M L A L A E K R L A E V K K T Y P G A V L G D P N D V R V V Y L F T R D P K D F Y E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S S S
T T T
T T
S S T T T
S S S
T

. . . .

Sequence H A V A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	K	M	F	F	V	D	L	S	R	C	T	A	C	R	G	C	Q	I	A	C	K	Q	W	K	N	L	P	A	E	E	T	R	N	T	G	S	H	Q	N	P	P	D	L	S	Y	V	T	L	K	T	V	R	F	T	E	K	S	R	K	G	P	G	I	D	W	L	F	F	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								G	G	G																T									S	S	S	S			S	S	S		B	T	T	B	S											S	S	S	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	E	Q	C	R	H	C	V	E	P	P	C	K	G	Q	A	D	V	D	L	E	G	A	V	V	K	D	E	T	T	G	A	V	L	F	T	E	L	T	A	K	V	D	G	E	S	V	R	S	A	C	P	Y	D	I	P	R	I	D	P	V	T	K	R	L	S	K	C	D	M	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S												T	T	S					T	T	T							G	G	G	G	G	S										T	T							T	T	T								T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	D	R	V	Q	N	G	L	L	P	A	C	V	K	T	C	P	T	G	T	M	N	F	G	D	E	Q	E	M	L	A	L	A	E	K	R	L	A	E	V	K	K	T	Y	P	G	A	V	L	G	D	P	N	D	V	R	V	V	Y	L	F	T	R	D	P	K	D	F	Y	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T										S	S	S																						T	T	T		T	T				S	S	T	T	T		S						S	S							T
	.	.	.	.
Sequence	H	A	V	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S