PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6s67D_

Fold library id	PDB Header	Molecule	Title
c6s67D_	2.47	PDB header: fluorescent protein	Chain: D: PDB Molecule: aequorea cf. australis fluorescent protein 1 (aausfp1);

Links to external resources
Added to library: Sat Jul 25 08:23:58 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence L F R E K I P Y V V E M E G D V E G M K F S V R G K G H G D A N T G K I E A S F I C T T G E L P V P W S S I L T T V A Q C F A K Y P N D I K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T T T T T T S S
S S
T G G G T T T
G G G S B
T T S

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence D Y P K S A M P E G Y V Q E R T I T F E N D G V Y K T R A E V T Y E K G S V Y N R V T L N G S G F K K G G N I L G K K L E F N Y N P H C I Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T
T T S
T T S
T T S T T T T T
B
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V L P D V Q N N G I K C Y I N I V H D V I G G G Q I I A A H Q Q L N T P L G G G P V D I P H Y H H I Q A H T I L S K D P K E T R D H M N V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G T B T T S
S S S S
S
T T
S S

. . . . . . . . . 220 . . .

Sequence E V F R A I D C K T A Y A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	L	F	R	E	K	I	P	Y	V	V	E	M	E	G	D	V	E	G	M	K	F	S	V	R	G	K	G	H	G	D	A	N	T	G	K	I	E	A	S	F	I	C	T	T	G	E	L	P	V	P	W	S	S	I	L	T	T	V	A	Q	C	F	A	K	Y	P	N	D	I	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S													T	T													T	T	T	T									T	T	S	S		S	S		T	G	G	G	T	T	T			G	G	G	S	B			T	T	S
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	D	Y	P	K	S	A	M	P	E	G	Y	V	Q	E	R	T	I	T	F	E	N	D	G	V	Y	K	T	R	A	E	V	T	Y	E	K	G	S	V	Y	N	R	V	T	L	N	G	S	G	F	K	K	G	G	N	I	L	G	K	K	L	E	F	N	Y	N	P	H	C	I	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T	T	T	T											T	T	S													T	T												S			T	T	S	T	T	T	T	T		B		S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	L	P	D	V	Q	N	N	G	I	K	C	Y	I	N	I	V	H	D	V	I	G	G	G	Q	I	I	A	A	H	Q	Q	L	N	T	P	L	G	G	G	P	V	D	I	P	H	Y	H	H	I	Q	A	H	T	I	L	S	K	D	P	K	E	T	R	D	H	M	N	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					G	G	G	T												B	T	T	S														S	S	S	S							S													T	T			S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.
Sequence	E	V	F	R	A	I	D	C	K	T	A	Y	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T