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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6s32D_

Fold library idPDB HeaderMoleculeTitle
c6s32D_1.35PDB header: flavoproteinChain: D: PDB Molecule: nadh:flavin oxidoreductase/nadh oxidase;


Added to library: Sat Feb 1 08:28:06 2020
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MNTNIDLFSPVRLGRYELPNRMVMAPLTRNRAGEGNVPRELNAEYYAQRVSAGLIITEATQVSPQGLGYP
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Known secondary structure (DSSP)





TTS
TTS
S







BGGGB

TTTTSSSSGGG

ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence FTPGIHSQEQVEGWRLVTKAVHDRGGKIFLQLWHVGRISHPDLQVDGALPVAPSAIAPSEGMAATYEGEK
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Known secondary structure (DSSP) T

BSSSTT



TTSS
GGGSGGG


SSS


SS


SSS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYVTPRALETAEIPGIVEQYRQGAKNALAAGFDGVEIHSANGYLLDQFLHDGSNHRTDEYGGSIENRARL
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GGGTT
S

TTS
TTT



STTSSS
 .........220.........230.........240.........250.........260.........270.........280
Sequence LMEVTEAVVSVWGADRVGVRLSPSGTFGSVYDSDLKALFTYVVDALNQFELAYLHLVEPRELSSKYFRPI
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Known secondary structure (DSSP)
GGG
TT

TTT


TTGGG

S




STTT
 .........290.........300.........310.........320.........330.........340.........350
Sequence YKGTLISAGGYDRESGNAVLASGDADLVAYGRLFISNPDLPQRFALNAQLNPYDRSSFYGGDKRGYTDYP
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Known secondary structure (DSSP)

S
SS

TS
SS
TTTT






GGGSSS
SSTTTT


 ..
Sequence SL
Predicted secondary structure

SS confidence

Known secondary structure (DSSP)


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Imperial College,
London
Michael Sternberg

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