PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6rk0A_

Fold library id	PDB Header	Molecule	Title
c6rk0A_	0.99	PDB header: flavoprotein	Chain: A: PDB Molecule: uncharacterized protein;

Links to external resources
Added to library: Sat May 11 08:16:25 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence P E A P S D R T H V K R Y H W L A R Y D Q E T V K A I L D A T P L A H V G C M M N G V P F V T P T F F W R E G D R V Y W H G S S A G R L F K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G
T T G G G
T
S T T
T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A L E H Q D I C L T V S L L D G L V I A R S A Y N F N C N F R S V M L L G R A E L I S D E A V K A E K L R N F V D G L I P G E W E R L R P V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) G G G S
S S G G G
S T T
G G G S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence H A K E I E A T A V A S L S I A E A S C K V R T G P P L D D E E D Y A F P S W A G V I P I R Y Q V L P P E P D P R N L P D V P M P E D I L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T S S S
S S
G G G T T S
T T S
T T
G G G G G

. . . .

Sequence F R L G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	P	E	A	P	S	D	R	T	H	V	K	R	Y	H	W	L	A	R	Y	D	Q	E	T	V	K	A	I	L	D	A	T	P	L	A	H	V	G	C	M	M	N	G	V	P	F	V	T	P	T	F	F	W	R	E	G	D	R	V	Y	W	H	G	S	S	A	G	R	L	F	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	G	G	G				T	T	G	G	G														T		S									T	T													T	T								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	L	E	H	Q	D	I	C	L	T	V	S	L	L	D	G	L	V	I	A	R	S	A	Y	N	F	N	C	N	F	R	S	V	M	L	L	G	R	A	E	L	I	S	D	E	A	V	K	A	E	K	L	R	N	F	V	D	G	L	I	P	G	E	W	E	R	L	R	P	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		G	G	G	S																S	S	G	G	G																																			S	T	T		G	G	G	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	H	A	K	E	I	E	A	T	A	V	A	S	L	S	I	A	E	A	S	C	K	V	R	T	G	P	P	L	D	D	E	E	D	Y	A	F	P	S	W	A	G	V	I	P	I	R	Y	Q	V	L	P	P	E	P	D	P	R	N	L	P	D	V	P	M	P	E	D	I	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							T								S	S	S								S	S					G	G	G	T	T	S																				T	T	S		T	T					G	G	G	G	G
	.	.	.	.
Sequence	F	R	L	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)