PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ref4_

Fold library id	PDB Header	Molecule	Title
c6ref4_	3.30	PDB header: proton transport	Chain: 4: PDB Molecule: mitochondrial atp synthase associated protein asa4;

Links to external resources
Added to library: Sat Jul 6 09:14:08 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence A V S K K E V L Y F L S S K D A E S S T A V K S Y L K S L Y A G A Q V E A T E T D A S E L I A Q L E K K Y L S A Q V V E P G V H N I A L P L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T T
T T
S
S
T T S
T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence G E S G S A P V K R Y A A E L F N L G A Q A G F E C P F I E V S K K F G Q E T A T S E T V K D V L N K T K S Y V S A D Y N A A L N E V L S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S S S T
T S S
B T T S T T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence V E A E I N G P V L F D G K T E G F K K F A A K A K A V A V S R G L P A D T I L A Y C A G S A N E D A A D K V S K E F F T W F E S A Y T A D

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
B S
S S S T T
S S

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence A A A E V K A I E A E A A S I L D R H L A K P V A Q I R K E Q A S A Y A S L L K R A E T A K G A K W A E K Y L E D V K A V Q W F D A S V A E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
T S
S S

. . . . . . . . . 290

Sequence A P A S G P K V A A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T
S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	A	V	S	K	K	E	V	L	Y	F	L	S	S	K	D	A	E	S	S	T	A	V	K	S	Y	L	K	S	L	Y	A	G	A	Q	V	E	A	T	E	T	D	A	S	E	L	I	A	Q	L	E	K	K	Y	L	S	A	Q	V	V	E	P	G	V	H	N	I	A	L	P	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S					T	T	T																			T	T								S		S																						T	T	S				T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	E	S	G	S	A	P	V	K	R	Y	A	A	E	L	F	N	L	G	A	Q	A	G	F	E	C	P	F	I	E	V	S	K	K	F	G	Q	E	T	A	T	S	E	T	V	K	D	V	L	N	K	T	K	S	Y	V	S	A	D	Y	N	A	A	L	N	E	V	L	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T		S	S	S																		T																T	S	S			B						T	T	S	T	T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	V	E	A	E	I	N	G	P	V	L	F	D	G	K	T	E	G	F	K	K	F	A	A	K	A	K	A	V	A	V	S	R	G	L	P	A	D	T	I	L	A	Y	C	A	G	S	A	N	E	D	A	A	D	K	V	S	K	E	F	F	T	W	F	E	S	A	Y	T	A	D
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S			B	S		S	S	S																	T	T														S	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	A	A	A	E	V	K	A	I	E	A	E	A	A	S	I	L	D	R	H	L	A	K	P	V	A	Q	I	R	K	E	Q	A	S	A	Y	A	S	L	L	K	R	A	E	T	A	K	G	A	K	W	A	E	K	Y	L	E	D	V	K	A	V	Q	W	F	D	A	S	V	A	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				T	T	S																						T	S		S	S
	.	.	.	.	.	.	.	.	.	290
Sequence	A	P	A	S	G	P	K	V	A	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T	T		S