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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6rbfA_

Fold library idPDB HeaderMoleculeTitle
c6rbfA_2.70PDB header: antimicrobial proteinChain: A: PDB Molecule: mucin-2;


Added to library: Sat Aug 17 08:31:40 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence APGTCSIYGSGHYITFDGKYYDFDGHCSYVAVQDYCGQNSSLGSFSIITENVPCGTTGVTCSKAIKIFMG
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Known secondary structure (DSSP)

TTT
TTS



SSS

SS
TT

S
SSSS
T
 .........80.........90.........100.........110.........120.........130.........140
Sequence RTELKLEDKHRVVIQRDHVAYTTREVGQYLVVESSTGIIVIWDKRTTVFIKLAPSYKGTVCGLCGNFDHR
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Known secondary structure (DSSP) TTT




TTTTS
SSS

GGGTTS
BSTT


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence SNNDFTTRDHMVVSSELDFGNSWKEAPTCPDVSTNPEPCSLNPHRRSWAEKQCSILKSSVFSICHSKVDP
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Known secondary structure (DSSP) STT

B
TTS
B
S
TBSSTTS








GGGGGGGSGGGTTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KPFYEACVHDSCSCDTGGDCECFCSAVASYAQECTKEGACVFWRTPDLCPIFCDYYNPPHECEWHYEPCG
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Known secondary structure (DSSP)

SS
T






SSSS


GGGG

TT



TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence NRSFETCRTINGIHSNISVSYLEGCYPRCPKDRPIYEEDLKKCVTADKCGCYVEDTHYPPGASVPTEETC
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Known secondary structure (DSSP)
TT

BS


SS

TT





TTS
GGGT
GGGS
SSS

TT




SSSS
 .........360.........370..
Sequence KSCVCTNSSQVVCRPEEGFCYW
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Known secondary structure (DSSP)
TTS








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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