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Protein Homology/analogY Recognition Engine V 2.2 |
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Fold library id | PDB Header | Molecule | Title |
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c6qwnD_ | 3.89 | PDB header: plant protein | Chain: D: PDB Molecule: pollen-specific leucine-rich repeat extensin-like protein |
Added to library: Sat Mar 21 09:50:30 2020 | |
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Links to external resources | |
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  | 1 | . | . | . | . | . | . | . | . | 10 | . | . | . | . | . | . | . | . | . | 20 | . | . | . | . | . | . | . | . | . | 30 | . | . | . | . | . | . | . | . | . | 40 | . | . | . | . | . | . | . | . | . | 50 | . | . | . | . | . | . | . | . | . | 60 | . | . | . | . | . | . | . | . | . | 70 |
Sequence | L | D | L | K | F | A | N | N | R | L | K | R | A | Y | I | A | L | Q | A | W | K | K | A | F | Y | S | D | P | F | N | T | A | A | N | W | V | G | P | D | V | C | S | Y | K | G | V | F | C | A | P | A | L | D | D | P | S | V | L | V | V | A | G | I | D | L | N | H | A | D | I |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | T | T | T | T | T | T | S | S | G | G | G | S | T | T | ![]() | ![]() | ![]() | ![]() | ![]() | S | S | T | T | S | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 80 | . | . | . | . | . | . | . | . | . | 90 | . | . | . | . | . | . | . | . | . | 100 | . | . | . | . | . | . | . | . | . | 110 | . | . | . | . | . | . | . | . | . | 120 | . | . | . | . | . | . | . | . | . | 130 | . | . | . | . | . | . | . | . | . | 140 |
Sequence | A | G | Y | L | P | P | E | L | G | L | L | T | D | V | A | L | F | H | V | N | S | N | R | F | C | G | V | I | P | K | S | L | S | K | L | T | L | M | Y | E | F | D | V | S | N | N | R | F | V | G | P | F | P | T | V | A | L | S | W | P | S | L | K | F | L | D | I | R | Y | N |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | ![]() | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | ![]() | ![]() | S | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | S | S | T | T | T | T | S | T | T | ![]() | ![]() | ![]() | S | S |   | . | . | . | . | . | . | . | . | . | 150 | . | . | . | . | . | . | . | . | . | 160 | . | . | . | . | . | . | . | . | . | 170 | . | . | . | . | . | . | . | . | . | 180 | . | . | . | . | . | . | . | . | . | 190 | . | . | . | . | . | . | . | . | . | 200 | . | . | . | . | . | . | . | . | . | 210 |
Sequence | D | F | E | G | K | L | P | P | E | I | F | D | K | D | L | D | A | I | F | L | N | N | N | R | F | E | S | T | I | P | E | T | I | G | K | S | T | A | S | V | V | T | F | A | H | N | K | F | S | G | C | I | P | K | T | I | G | Q | M | K | N | L | N | E | I | V | F | I | G | N |
Predicted secondary structure | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | T | ![]() | ![]() | ![]() | ![]() | S | S | ![]() | ![]() | ![]() | T | T | S | S | G | G | G | G | G | S | ![]() | ![]() | ![]() | S | S | B | T | T | T | T | S | S | ![]() | ![]() | ![]() | T | T |   | . | . | . | . | . | . | . | . | . | 220 | . | . | . | . | . | . | . | . | . | 230 | . | . | . | . | . | . | . | . | . | 240 | . | . | . | . | . | . | . | . | . | 250 | . | . | . | . | . | . | . | . | . | 260 | . | . | . | . | . | . | . | . | . | 270 | . | . | . | . | . | . | . | . | . | 280 |
Sequence | N | L | S | G | C | L | P | N | E | I | G | S | L | N | N | V | T | V | F | D | A | S | S | N | G | F | V | G | S | L | P | S | T | L | S | G | L | A | N | V | E | Q | M | D | F | S | Y | N | K | F | T | G | F | V | T | D | N | I | C | K | L | P | K | L | S | N | F | T | F | S |
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | B | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | T | T | ![]() | ![]() | ![]() | ![]() | G | G | G | G | G | T | T | ![]() | ![]() | ![]() | S | ![]() | ![]() | S | G | G | G | G | G | S | S | B |   | . | . | . | . | . | . | . | . | . | 290 | . | . | . | . | . | . | . | . | . | 300 | . | . | . | . | . | . | . | . | . | 310 | . | . | . | . | . | . | . | . | . | 320 | . | . | . | . | . | . | . | . | . | 330 | . | . | . | . | . | . |
Sequence | Y | N | F | F | N | G | E | A | Q | V | P | G | S | S | Q | E | K | Q | F | D | D | T | S | N | C | L | Q | N | R | P | N | Q | K | S | A | K | E | C | L | P | V | V | S | R | P | V | D | C | S | K | D | K | C | A | G | G | ||||||||||||||
Predicted secondary structure | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | ![]() | |||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
SS confidence | ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Known secondary structure (DSSP) | S | S | S | T | T | S | S | S | S | S | S | S | T | T | T | S | S | S | G | G | G | S | S | S | S | T | T | T | T |
Download: | PDB structure | FASTA sequence |
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