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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6qp8B_

Fold library idPDB HeaderMoleculeTitle
c6qp8B_2.33PDB header: signaling proteinChain: B: PDB Molecule: ip13724p;


Added to library: Sat Aug 24 08:25:00 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NLYYEPPCCTGEHVQDFSCGPLHYKTFYMDERNNALYVGAMDRIFRLNLRNISQSICERDVLILEPTGSD
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Known secondary structure (DSSP)

B




S




SSS


GGGTBTSS
GGG

TTTS



 .........80.........90.........100.........110.........120.........130.........140
Sequence ILNCVSKGKREKVECRNHIRVIQPMNFNGQKLYVCGTNAHNPKDYVINANLTHLPRSQYVPGIGLGIGKC
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Known secondary structure (DSSP) TT

TTTTTS
BSSS
TTTS
TTS
B

TT


TT
SB
TTTS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PYDPADNSTAVYVENGNPFGLPALYAGTNAEFTKADSVIFRSDLYNLTNGRKEANFKRTVKYDSKLLDKP
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Known secondary structure (DSSP)
SSTT



SSSGGG

S
SSS




TTT





TT
TTT
SS
 .........220.........230.........240.........250.........260.........270.........280
Sequence NFVGSFEIGEFVYFFFREHAVEYINCGKAVYSRVARVCKNDRGGKYMISQNWATYLKARMNCSISSEFPF
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Known secondary structure (DSSP) TT
GGGTTT


TT



SGGGTTB
SS
B


SSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence YFNEIQSVYKMPTDDTKFYATFTTNTNGLIGSAVCSYDIRDINAAFDGKFKEQATSNSAWLPVLNSKVPE
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Known secondary structure (DSSP)



TT
SS

SSSS
TS
BSSTTS


GGGS
S
 .........360.........370.........380.........390.........400.........410.........420
Sequence PRPGTCHNDTATLPDSVLNFIRKHPLMDKAVDHEFGNPVFFKRDVILTKLVVDKIRIDKLNQEFLVYFVA
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Known secondary structure (DSSP) S
TT


S
GGGS


BBSS
B

GGGS
ST


SGGG
 .........430.........440.........450.........460.........470.........480.........490
Sequence TTSGHIYKIVQFMHYGQRHSNLVDIFEASPHSEPIREMTLSHKTGSLYVATDHQVKQIDIAMCARRYDSC
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Known secondary structure (DSSP) TTSTTSS
TTS


TTTT
SS
S



S
 .........500.........510.........520.........530.........540.........550.........560
Sequence FRCVSDPYCGWDKDVNACRPYQLGLLQDVANETSGICDTSVLRKKVTSSYGQTLHLSCFVKMPEVLRKKQ
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Known secondary structure (DSSP) TTSTTTTTT

TTSB

TT


GGGGGGGSSTT


SBSS

GGGTTS
 .........570.........580.........590.........600.........610.........620
Sequence TRWYHHSTEKGRYEVRYTPTKYIDTNEGGLVLLAVNEGDGGRYDSYLDGTLLCSYGVTVD
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Known secondary structure (DSSP) TTT



TTT
TTS

S

STT
SSS


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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