PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6pifH_

Fold library id	PDB Header	Molecule	Title
c6pifH_	3.60	PDB header: rna binding protein/rna	Chain: H: PDB Molecule: type i-f crispr-associated endoribonuclease cas6/csy4;

Links to external resources
Added to library: Sat Oct 5 08:20:30 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K W Y Y K T I T F L P E L C N N E S L A A K C L R V L H G F N Y Q Y E T R N I G V S F P L W C D A T V G K K I S F V S K N K I E L D L L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S
S S T T T T
T T
S S S
S
B S S S T T T G G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence Q H Y F V Q M E Q L Q Y F H I S N T V L V P E D C T Y V S F R R C Q S I D K L T A A G L A R K I R R L E K R A L S R G E Q F D P S S F A Q K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S T T T T S
B
S S
B
S T T T S T
S S S
T T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . .

Sequence E H T A I A H Y H S L G E S S K Q T N R N F R L N I R M L S E Q P R E G N S I F S S Y G L S N S E N S F Q P V P L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
S S S
S
S S
S S
S
S T T
B

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	W	Y	Y	K	T	I	T	F	L	P	E	L	C	N	N	E	S	L	A	A	K	C	L	R	V	L	H	G	F	N	Y	Q	Y	E	T	R	N	I	G	V	S	F	P	L	W	C	D	A	T	V	G	K	K	I	S	F	V	S	K	N	K	I	E	L	D	L	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											S	S	S																	S	S	T	T	T	T									T	T			S	S	S			S						B	S	S	S	T	T	T	G	G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	Q	H	Y	F	V	Q	M	E	Q	L	Q	Y	F	H	I	S	N	T	V	L	V	P	E	D	C	T	Y	V	S	F	R	R	C	Q	S	I	D	K	L	T	A	A	G	L	A	R	K	I	R	R	L	E	K	R	A	L	S	R	G	E	Q	F	D	P	S	S	F	A	Q	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S	S	T	T					T	T	S			B								S	S				B								S	T	T	T	S														T			S	S	S					T	T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.
Sequence	E	H	T	A	I	A	H	Y	H	S	L	G	E	S	S	K	Q	T	N	R	N	F	R	L	N	I	R	M	L	S	E	Q	P	R	E	G	N	S	I	F	S	S	Y	G	L	S	N	S	E	N	S	F	Q	P	V	P	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	S														S	S	S															S				S	S				S	S			S		S	T	T					B