PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6pa7N_

Fold library id	PDB Header	Molecule	Title
c6pa7N_	2.94	PDB header: transferase/dna	Chain: N: PDB Molecule: dna (cytosine-5)-methyltransferase 3b;

Links to external resources
Added to library: Sat Jun 20 10:40:24 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence K L Y P A I P A A R R R P I R V L S L F D G I A T G Y L V L K E L G I K V G K Y V A S E V C E E S I A V G T V K H E G N I K Y V N D V R N I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S
S
T T T S
S S S S T T
S
S
G G G

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence T K K N I E E W G P F D L V I G G S P E G T G R L F F E F Y H L L N Y S R P K E G D D R P F F W M F E N V V A M K V G D K R D I S R F L E C

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S
S
T T
S
T S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence N P V M I D A I K V S A A H R A R Y F W G N L P G M N R I F G F P V H Y T D V S N M G R G A R Q K L L G R S W S V P V I R H L F A P L K D Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S
S S
S
S S
S S S
T T
T T S
S S T T S G G G T T T

.

Sequence F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	K	L	Y	P	A	I	P	A	A	R	R	R	P	I	R	V	L	S	L	F	D	G	I	A	T	G	Y	L	V	L	K	E	L	G	I	K	V	G	K	Y	V	A	S	E	V	C	E	E	S	I	A	V	G	T	V	K	H	E	G	N	I	K	Y	V	N	D	V	R	N	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								T	T											S			S									T	T	T	S										S	S	S										S	T	T		S				S		G	G	G
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	T	K	K	N	I	E	E	W	G	P	F	D	L	V	I	G	G	S	P	E	G	T	G	R	L	F	F	E	F	Y	H	L	L	N	Y	S	R	P	K	E	G	D	D	R	P	F	F	W	M	F	E	N	V	V	A	M	K	V	G	D	K	R	D	I	S	R	F	L	E	C
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S				S																									S			T	T													S															T	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	N	P	V	M	I	D	A	I	K	V	S	A	A	H	R	A	R	Y	F	W	G	N	L	P	G	M	N	R	I	F	G	F	P	V	H	Y	T	D	V	S	N	M	G	R	G	A	R	Q	K	L	L	G	R	S	W	S	V	P	V	I	R	H	L	F	A	P	L	K	D	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	S	S	S		S	S									S		S	S		S	S	S										T	T											T	T	S			S	S	T	T					S	G	G	G	T	T	T
	.
Sequence	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)