PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ozuB_

Fold library id	PDB Header	Molecule	Title
c6ozuB_	2.40	PDB header: translation	Chain: B: PDB Molecule: eukaryotic translation initiation factor 4 gamma 5;

Links to external resources
Added to library: Sat Dec 14 08:40:44 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence E R K L H N E V L G I L G R V G E G N L P K M K E E L T N L P I R Q S T D K E I Q D V I Q V I F N K S I Q P E D S I F V P Y Y V K L V V S L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T T S
T T S
T T
G G G T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence I N D I G E G E P A G R F I R N A I I R Q C Q R T F E N A E E A Q A Q L E R E I A N L P E E E A E Q R R L I F A G K Q K A N I N F L G L L F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S T S S S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence T H G L V R E K V V L H V L E W L L Y G T E R K R R F P A D Y E L I H F M N L L L T C G K S F S K E G Q E F V P K F R A V L E E L M H M H P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S
S S
S S
S S S S S
T T T S

. . . . . . . . . 220 . . . . . . . . . 230 . . . .

Sequence Q R R M Q F L L L N T V E T I D N N W I L E H H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	E	R	K	L	H	N	E	V	L	G	I	L	G	R	V	G	E	G	N	L	P	K	M	K	E	E	L	T	N	L	P	I	R	Q	S	T	D	K	E	I	Q	D	V	I	Q	V	I	F	N	K	S	I	Q	P	E	D	S	I	F	V	P	Y	Y	V	K	L	V	V	S	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	T	T	T										T	S			T	T	S																T	T		G	G	G	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	I	N	D	I	G	E	G	E	P	A	G	R	F	I	R	N	A	I	I	R	Q	C	Q	R	T	F	E	N	A	E	E	A	Q	A	Q	L	E	R	E	I	A	N	L	P	E	E	E	A	E	Q	R	R	L	I	F	A	G	K	Q	K	A	N	I	N	F	L	G	L	L	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S		T	T	S																																T	S	S	S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	T	H	G	L	V	R	E	K	V	V	L	H	V	L	E	W	L	L	Y	G	T	E	R	K	R	R	F	P	A	D	Y	E	L	I	H	F	M	N	L	L	L	T	C	G	K	S	F	S	K	E	G	Q	E	F	V	P	K	F	R	A	V	L	E	E	L	M	H	M	H	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T		S																T	T	S			S	S																	S	S		S	S	S	S	S		T													T	T	S
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.
Sequence	Q	R	R	M	Q	F	L	L	L	N	T	V	E	T	I	D	N	N	W	I	L	E	H	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T