PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6ovkR_

Fold library id	PDB Header	Molecule	Title
c6ovkR_	1.76	PDB header: signaling protein	Chain: R: PDB Molecule: siderophore-interacting protein;

Links to external resources
Added to library: Sat Mar 7 08:26:05 2020

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence D W R A D Y H S R I G E Q R R L T L A D G T Q V Q L N T D S A L N V A F D Q Q A R R L R L V R G E M L I T R P A L A D S R P L W V D T E H G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
T T
S S
S S
T T
S S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence R L E S T L A Q F N V R L H G Q H T Q A T V Y Q G S V A L Q P A L H A Y P P I L L G A G E Q A S F N Q Q G L L A R Q A V A A V A P A W S Q G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T
S S
T T
S S
S S
G G G G T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence M L V A Q G Q P L A A F I E D L A R Y R R G H L A C D P A L A G L R V S G T F P L E N T D K I I A A V A E T L Q L E V Q H F T R Y W V T L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S S S
G G G T T
T T
T T T T

. . .

Sequence P R M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

Interactive 3D view in JSmol

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Accessibility Statement

Please cite: The Phyre2 web portal for protein modeling, prediction and analysis

Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]

© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg
Disclaimer

Terms and Conditions

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	D	W	R	A	D	Y	H	S	R	I	G	E	Q	R	R	L	T	L	A	D	G	T	Q	V	Q	L	N	T	D	S	A	L	N	V	A	F	D	Q	Q	A	R	R	L	R	L	V	R	G	E	M	L	I	T	R	P	A	L	A	D	S	R	P	L	W	V	D	T	E	H	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T								T	T	S							T	T									S	S									S						S			T	T		S	S							T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	R	L	E	S	T	L	A	Q	F	N	V	R	L	H	G	Q	H	T	Q	A	T	V	Y	Q	G	S	V	A	L	Q	P	A	L	H	A	Y	P	P	I	L	L	G	A	G	E	Q	A	S	F	N	Q	Q	G	L	L	A	R	Q	A	V	A	A	V	A	P	A	W	S	Q	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)															S	S																T	T			S	S						T	T							S	S											S	S		G	G	G	G	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	M	L	V	A	Q	G	Q	P	L	A	A	F	I	E	D	L	A	R	Y	R	R	G	H	L	A	C	D	P	A	L	A	G	L	R	V	S	G	T	F	P	L	E	N	T	D	K	I	I	A	A	V	A	E	T	L	Q	L	E	V	Q	H	F	T	R	Y	W	V	T	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		T	T	S	S	S						G	G	G	T	T									T	T													T	T								T	T
	.	.	.
Sequence	P	R	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)