PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6or6A_

Fold library id	PDB Header	Molecule	Title
c6or6A_	5.30	PDB header: motor protein	Chain: A: PDB Molecule: midasin;

Links to external resources
Added to library: Sat Jun 1 08:29:01 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence G L H M Q A I W D K W H A F V P R T Y D Q W S L W N T V D K L L T Q Y V N A S M E T T A C E V V G T S L S L L N K V L V E N E V G D I Y S Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S G G G T T
S T
T T S
T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence L K I L G K G V N E L K S S I L P E N L V N L F N C L A S L D L L H I F I K Y T T S S F F L T D D F V R F I R V C F H S R I G N L L T L L H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
S
S
S T T S
S T T

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence G I S F F D F C S L T T G N I L G R I A L A F T S A N I F E H A R L A L L Q H F M D H S S L L A E D S S T K M N L I L L Q R Y A V I I S I F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
G G G T
G G G G T T T T
T T T T T T S
S S S T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence L D Q G K C E K A N D L I T K L S L P Y E E L A E N F V S I L E A C K A F L V A N S E F I S Y T Y T E R F I H S L R F L Q K M L K N Q G M A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T
S
T S
S S
S T T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence Y I Y F A S G M L L V Y V P D K P F D P A S T V Y R S L N E S I V P L Y S E L E F F M K S V V L N Q Y I F E L A M R L S K E S N I A V V E E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
S
S
T S
S
S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence A K S F V T K W K A Y I E R I R E A Y P Q F V D V Y E L I L S F I S F M I Y G I E L L M F E A K R R L D E R S Q I L S T L I L T L V D P S S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
S S
T T T S S

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence F A R S F D D V S N L I E Q I K V L N D S I R F E I Y L F L A S R L C S E K Q H S D T H S L A N S F V L L A N E F Y I H N A K I K Q K E L E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence E V V I E R K R F L Q L Q F A F W S L Y N E I Y S E K M N V I P L E Q L M N T G S Y L A K K I K V K N P D M I A S S G F D I V S V V L M M G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S
S S
S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence V K S T N E P S K A I E V R D L I K I V E S R A I S L I K N W P E N F V L R G L K D A I D A I L N L S P F S P I A E Y L S K L E R V F H L L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S T T
S S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence S E W E K L A S R E Y S L A N E M D L I K K K I I D W R K F E L S N W N N L L K L E E Y K L S E R V Y P R L Y S I L Q F I I L K P F F F T K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T T
T T T T S T T

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence Q N L C E S A S I I V Q F I T D L T V G E F Q L C L K C L L S F S Q H A A S L R I C H G I D A M L L N I Y H Y F E Q F L S K V S E A I H T Q

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T S
T T
S T T S S T

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence K Q S L E N S I K E R I L L M S W K D T N V Y A L K E S A K K S H A E L F K V L H R Y R E V L R Q P V S S Y L S Q K H D W D S L E N N S A M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S
S
S S T S
T T T T S

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence W V A K K V N L S P S Y I E K T E I M K L V P V R F S N T P T T L R L M W T L F A N V E K S T F T N M V S N L I T D A R E L M K L T P E T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T
S
S
T
S
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence N D D N L S E I K H L K S R K H L L L T E T F K T L K A F G L Q Y R V K A G I E E N L S N L R N L L A V I P T F P V L S I E K V D R S L M K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S S
S S
T T S S

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence S L D F I P K F Q T L A G H Q H N D L V P E V Q K G V G L F N S M L S L Q L G E R A Q L V E F T N E L L A L K N V Y S E V Y D H D F E N R A

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S
T
T T

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence Q A V S M L C Q I Y A I V I Q K H S S F Q S I G H E L S R F A D L L S N K L F P S A D K V S S I R D Q Q K G I N D L I E Y C R K K R T E L P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
T T T
S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence E L S Y C F K H L V S L Q S L K D E F L N L M N F V L N L F D S L L S S I E T A T K N M R T F K E L A E T S S F I E M S S C F S K V L R A F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T T S S
S S T S S

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence N L K F Q S M K L S S L K E K L R S S S V D K M S C Q L L M L F L P V C E Q F I N L A E S V L D Y F I N V H N S N L D S L S K I S T L F F M

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T

. . . .

Sequence V A N N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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Phyre2 is part of Genome3D

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	G	L	H	M	Q	A	I	W	D	K	W	H	A	F	V	P	R	T	Y	D	Q	W	S	L	W	N	T	V	D	K	L	L	T	Q	Y	V	N	A	S	M	E	T	T	A	C	E	V	V	G	T	S	L	S	L	L	N	K	V	L	V	E	N	E	V	G	D	I	Y	S	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S	G	G	G	T	T							S																		T																								T	T	S		T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	L	K	I	L	G	K	G	V	N	E	L	K	S	S	I	L	P	E	N	L	V	N	L	F	N	C	L	A	S	L	D	L	L	H	I	F	I	K	Y	T	T	S	S	F	F	L	T	D	D	F	V	R	F	I	R	V	C	F	H	S	R	I	G	N	L	L	T	L	L	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																			S	S																		T			S				S		S											T	T	S								S	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	G	I	S	F	F	D	F	C	S	L	T	T	G	N	I	L	G	R	I	A	L	A	F	T	S	A	N	I	F	E	H	A	R	L	A	L	L	Q	H	F	M	D	H	S	S	L	L	A	E	D	S	S	T	K	M	N	L	I	L	L	Q	R	Y	A	V	I	I	S	I	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S					G	G	G	T		G	G	G	G					T	T	T	T																				T	T	T	T	T	T	S		S	S	S																	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	L	D	Q	G	K	C	E	K	A	N	D	L	I	T	K	L	S	L	P	Y	E	E	L	A	E	N	F	V	S	I	L	E	A	C	K	A	F	L	V	A	N	S	E	F	I	S	Y	T	Y	T	E	R	F	I	H	S	L	R	F	L	Q	K	M	L	K	N	Q	G	M	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		S	S												T		S																						T	S		S	S		S													T	T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	Y	I	Y	F	A	S	G	M	L	L	V	Y	V	P	D	K	P	F	D	P	A	S	T	V	Y	R	S	L	N	E	S	I	V	P	L	Y	S	E	L	E	F	F	M	K	S	V	V	L	N	Q	Y	I	F	E	L	A	M	R	L	S	K	E	S	N	I	A	V	V	E	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S			S	S								S		S					T																	S													S				S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	A	K	S	F	V	T	K	W	K	A	Y	I	E	R	I	R	E	A	Y	P	Q	F	V	D	V	Y	E	L	I	L	S	F	I	S	F	M	I	Y	G	I	E	L	L	M	F	E	A	K	R	R	L	D	E	R	S	Q	I	L	S	T	L	I	L	T	L	V	D	P	S	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S			S	S																															T											T	T	S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	F	A	R	S	F	D	D	V	S	N	L	I	E	Q	I	K	V	L	N	D	S	I	R	F	E	I	Y	L	F	L	A	S	R	L	C	S	E	K	Q	H	S	D	T	H	S	L	A	N	S	F	V	L	L	A	N	E	F	Y	I	H	N	A	K	I	K	Q	K	E	L	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																																				T	T				S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	V	V	I	E	R	K	R	F	L	Q	L	Q	F	A	F	W	S	L	Y	N	E	I	Y	S	E	K	M	N	V	I	P	L	E	Q	L	M	N	T	G	S	Y	L	A	K	K	I	K	V	K	N	P	D	M	I	A	S	S	G	F	D	I	V	S	V	V	L	M	M	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																								S	S		S																																	S	S			S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	K	S	T	N	E	P	S	K	A	I	E	V	R	D	L	I	K	I	V	E	S	R	A	I	S	L	I	K	N	W	P	E	N	F	V	L	R	G	L	K	D	A	I	D	A	I	L	N	L	S	P	F	S	P	I	A	E	Y	L	S	K	L	E	R	V	F	H	L	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																														S	S			S	S													T	T				S	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	S	E	W	E	K	L	A	S	R	E	Y	S	L	A	N	E	M	D	L	I	K	K	K	I	I	D	W	R	K	F	E	L	S	N	W	N	N	L	L	K	L	E	E	Y	K	L	S	E	R	V	Y	P	R	L	Y	S	I	L	Q	F	I	I	L	K	P	F	F	F	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S		T	T	T																								T	T	T	T																										S	T	T
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	Q	N	L	C	E	S	A	S	I	I	V	Q	F	I	T	D	L	T	V	G	E	F	Q	L	C	L	K	C	L	L	S	F	S	Q	H	A	A	S	L	R	I	C	H	G	I	D	A	M	L	L	N	I	Y	H	Y	F	E	Q	F	L	S	K	V	S	E	A	I	H	T	Q
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																		S	T	T																		S		T	T		S												T	T	S	S	T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	K	Q	S	L	E	N	S	I	K	E	R	I	L	L	M	S	W	K	D	T	N	V	Y	A	L	K	E	S	A	K	K	S	H	A	E	L	F	K	V	L	H	R	Y	R	E	V	L	R	Q	P	V	S	S	Y	L	S	Q	K	H	D	W	D	S	L	E	N	N	S	A	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	S				S			S	S	T																									S		T	T	T	T	S
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	W	V	A	K	K	V	N	L	S	P	S	Y	I	E	K	T	E	I	M	K	L	V	P	V	R	F	S	N	T	P	T	T	L	R	L	M	W	T	L	F	A	N	V	E	K	S	T	F	T	N	M	V	S	N	L	I	T	D	A	R	E	L	M	K	L	T	P	E	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T																				S			S																		T																							S				S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	N	D	D	N	L	S	E	I	K	H	L	K	S	R	K	H	L	L	L	T	E	T	F	K	T	L	K	A	F	G	L	Q	Y	R	V	K	A	G	I	E	E	N	L	S	N	L	R	N	L	L	A	V	I	P	T	F	P	V	L	S	I	E	K	V	D	R	S	L	M	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						T																							S	S			S	S			T	T					S	S
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	S	L	D	F	I	P	K	F	Q	T	L	A	G	H	Q	H	N	D	L	V	P	E	V	Q	K	G	V	G	L	F	N	S	M	L	S	L	Q	L	G	E	R	A	Q	L	V	E	F	T	N	E	L	L	A	L	K	N	V	Y	S	E	V	Y	D	H	D	F	E	N	R	A
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T			S																																															T				T	T
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	Q	A	V	S	M	L	C	Q	I	Y	A	I	V	I	Q	K	H	S	S	F	Q	S	I	G	H	E	L	S	R	F	A	D	L	L	S	N	K	L	F	P	S	A	D	K	V	S	S	I	R	D	Q	Q	K	G	I	N	D	L	I	E	Y	C	R	K	K	R	T	E	L	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																T					T																		T	T																												S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	E	L	S	Y	C	F	K	H	L	V	S	L	Q	S	L	K	D	E	F	L	N	L	M	N	F	V	L	N	L	F	D	S	L	L	S	S	I	E	T	A	T	K	N	M	R	T	F	K	E	L	A	E	T	S	S	F	I	E	M	S	S	C	F	S	K	V	L	R	A	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																																																		T	T	T	S	S		S	S											T	S	S
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	N	L	K	F	Q	S	M	K	L	S	S	L	K	E	K	L	R	S	S	S	V	D	K	M	S	C	Q	L	L	M	L	F	L	P	V	C	E	Q	F	I	N	L	A	E	S	V	L	D	Y	F	I	N	V	H	N	S	N	L	D	S	L	S	K	I	S	T	L	F	F	M
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																	S	S				T	T	T
	.	.	.	.
Sequence	V	A	N	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)