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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6oeiA_

Fold library idPDB HeaderMoleculeTitle
c6oeiA_2.58PDB header: structural proteinChain: A: PDB Molecule: spindle pole body component spc42,sigma-54-dependent


Added to library: Sat Apr 27 08:30:32 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence EFINKAVQQNKELNFKLREKQNEIFELKKIAETLRSKLEKYVDITKKLEDQNLNLQIKISDLEKKLSDAN
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Known secondary structure (DSSP)
 .........80.........90.........100.........110.........120.........130.........140
Sequence SALKLXQYIGDAIGTIRDPQELFRTVTDKLRLLFAFDSAVIITIDRERREASVFFEXLRFELPEQLRHQT
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Known secondary structure (DSSP)

STTS

STTTT
SS


GGG

S
 .........150.........160.........170.........180.........190.........200.........210
Sequence RSIAGTWLEGHLDDRTVTVASIARDIPSFGADGAPLLWTLHELGXRQIVLSPLRSGGRVIGFLSFVSAEE
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Known secondary structure (DSSP)
TTSTTT

S
TTTSGGGG
STTTT

SSSSSS
 .........220.........230.........240...
Sequence KLWSDGDKSLLSGVSSSIAIAVSNALAYEALRQ
Predicted secondary structure




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Known secondary structure (DSSP)





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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