Fold library entry viewer: c6npsB_

Added to library: Sat Jul 18 08:43:04 2020
Links to external resources

	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	Q	G	M	D	F	T	L	N	Q	E	M	L	M	T	D	T	K	S	G	A	L	F	Y	Q	E	E	E	A	L	S	G	V	R	K	I	A	N	K	V	M	H	D	V	E	L	V	F	G	Y	Q	P	E	A	T	K	D	R	D	M	L	S	R	H	A	V	L	Y	G	T	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S						G	G	G	T	S	T	T	T			S							T	T	S																				S	S						S		G	G	G											T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	G	H	S	P	L	L	D	E	L	N	A	A	A	L	I	D	L	T	E	I	A	G	K	R	E	V	F	L	F	Q	V	V	D	Q	P	I	Q	G	V	E	K	A	L	V	I	A	G	S	D	K	R	G	T	I	Y	G	L	F	H	L	S	E	K	L	G	V	S	P	L	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S										T	T	S	S		G	G	G	T	T	T		S	S												T	T										S	S															T	T			T	T	T
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	D	W	S	G	V	L	P	A	R	K	E	S	F	S	L	K	G	D	Y	K	Y	V	S	K	E	P	S	V	K	Y	R	G	F	F	I	N	D	E	W	P	A	F	G	N	W	S	A	K	N	F	G	G	F	N	A	E	M	Y	D	H	V	F	E	L	L	L	R	L	K	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S								S						T	T									S	S	S								S		T	T											S	S	S	S														T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	N	Y	L	W	P	A	M	W	S	A	R	F	N	D	D	G	P	G	L	A	N	V	E	L	A	D	E	Y	G	V	I	M	G	A	S	H	H	E	P	C	L	R	Y	G	E	E	Y	K	Y	L	R	G	P	D	S	I	Y	G	D	A	W	N	F	I	T	N	R	E	G	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S			T	T	T	B	T	T	B	T										T							T	T			T	T			T	T								T	T	S	T	T		S		S		T	T	T	S
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	T	K	F	W	E	D	G	L	K	R	T	G	H	F	E	N	I	I	T	I	G	M	R	D	A	T	L	E	D	N	I	N	L	L	R	D	V	I	Q	T	Q	N	K	L	I	K	E	H	V	N	P	N	L	K	E	V	P	R	M	L	A	L	Y	K	E	V	E	P	F	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												T	T	S	S	B																																	T		S		G	G	G	S								T	T	T
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	Y	G	D	E	N	T	P	G	L	I	N	S	E	E	L	E	D	V	I	L	M	L	C	D	D	N	H	G	N	L	R	T	L	P	T	E	D	M	R	K	H	S	G	G	Y	G	M	Y	Y	H	F	D	Y	H	G	G	P	V	S	Y	E	W	I	N	S	S	Y	L	P	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		B		S	S	S	B		S	T	T		G	G	G	T	T							B		S	S	S		B						T	T	G	G	G		T	T								S	S	B		S	S	S			B		S	S
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	I	W	E	Q	M	T	M	A	Y	D	F	G	V	R	D	L	W	I	V	N	V	G	D	I	A	T	Q	E	L	P	L	S	F	F	L	D	L	A	Y	D	F	D	K	W	G	T	N	A	I	N	K	T	D	D	Y	T	K	Q	W	I	E	Q	Q	F	A	G	V	F	N	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T			S							T	T		T	T																			S	T	T	S	T	T															T	T	T	S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	E	Q	K	D	K	V	F	E	L	L	N	G	Y	T	K	I	A	H	N	R	R	P	E	A	M	N	V	D	V	Y	H	P	V	N	Y	H	E	T	D	Q	L	L	D	R	I	D	H	L	L	G	L	A	E	E	L	Y	Q	E	V	D	Q	Q	H	F	T	A	Y	F	A	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																				S		G	G	G			T	T	S	S		S	S	G	G	G																							S		G	G	G
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	V	Y	Y	P	T	V	G	N	L	N	L	Q	K	M	W	L	L	N	G	K	N	K	Y	A	A	Q	L	N	L	I	E	A	N	K	L	A	E	Q	V	K	A	C	L	K	R	D	Q	E	I	V	D	E	Y	H	T	I	A	D	G	K	F	Y	G	M	G	L	S	E	H	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T																										T	T		T																														T	T	T	T	T	T		S			S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	G	F	V	H	W	N	E	D	E	N	K	N	P	V	L	S	Y	V	L	P	V	N	K	P	R	L	L	V	S	I	D	G	T	E	L	R	S	E	G	S	P	W	H	V	N	T	L	P	L	V	D	F	L	E	P	D	V	N	Q	A	S	F	T	I	S	S	V	S	E	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	S	T	T												B	S	S								T	T	S	S							T	T	S								G	G	G	S	T	T											S	B	S	S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	K	A	E	Y	H	I	S	T	D	Q	D	W	L	S	C	S	A	A	N	G	V	L	D	G	K	N	K	L	S	E	T	I	H	V	F	V	D	R	D	G	L	A	D	Q	A	E	G	R	I	T	V	K	T	P	V	G	K	V	T	I	V	V	P	V	V	N	N	D	F	T
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S		T	T				S		S						S	S	S													T	T			S											S	S															T
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	N	Y	P	D	M	T	F	V	D	T	K	G	Y	I	S	I	E	A	E	H	F	A	T	Q	K	A	T	E	N	L	D	G	T	L	N	R	F	E	V	L	D	G	Y	G	K	T	L	S	A	I	K	A	F	P	T	D	T	H	Y	Q	V	G	K	D	A	P	F	V	E	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	S		T	T					S	S	S						T	T			S								T	T	S										T		S	S	S	S							S	T	T					T	T	T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	H	F	V	T	Q	E	A	G	V	Y	E	L	E	F	Y	L	Q	P	S	N	P	V	T	R	E	G	T	M	Y	A	G	I	Q	V	N	E	N	D	V	D	V	I	N	V	L	P	D	G	Y	H	V	D	G	P	H	W	G	I	D	V	I	N	N	I	R	T	T	K	T	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S	S																S	S	T	T										T	T	S								S		T	T			T	T	S										T
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.
Sequence	I	T	C	E	Q	G	L	N	K	L	R	I	Y	A	V	S	P	G	F	A	L	E	K	I	V	I	Y	P	D	G	K	K	L	A	N	S	Y	L	G	P	N	E	T	Y	Y	V	G	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					S											S	T	T											T	T							S	S		S					B	T	T

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PDB structure

FASTA sequence

Hidden Markov model

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