PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6njyB_

Fold library id	PDB Header	Molecule	Title
c6njyB_	1.76	PDB header: rna binding protein	Chain: B: PDB Molecule: type iv crispr associated cas6 rna endonuclease;

Links to external resources
Added to library: Sat Jul 13 08:17:27 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence N L Y F Q S N A M T G Y P Y P R P Q A V K I Q V K G H V P Y P K N A L A T V Y D I F R D I E T V N K A H E A K E A P P F A I K D F N M N G F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S T T T S S
S S T T T
T T
S T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence A I T S Y L A L P T D T V T E R L K T K G F H T V G Q P I Y L P Q N E L P P L Y G L K G V T I Q F R T P T A F K Y N T G Y V P E F Y G P V F

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S
T T
T T
S

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence I K S I T E S Y R R I I P G C P E F S T S D I L K Y I R F T A T D L Q K G K Y R L T E E L M V T G F K G K V Y L Q F K L S T P P E L K L L I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S T T
T T
S
T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . .

Sequence L Y F L E A A S I C G V G M K K A W G M G D I Y I T I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T G G G T T T
-

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

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Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	N	L	Y	F	Q	S	N	A	M	T	G	Y	P	Y	P	R	P	Q	A	V	K	I	Q	V	K	G	H	V	P	Y	P	K	N	A	L	A	T	V	Y	D	I	F	R	D	I	E	T	V	N	K	A	H	E	A	K	E	A	P	P	F	A	I	K	D	F	N	M	N	G	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S	T	T	T	S	S																	S	S												T	T	T										T	T				S								T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	A	I	T	S	Y	L	A	L	P	T	D	T	V	T	E	R	L	K	T	K	G	F	H	T	V	G	Q	P	I	Y	L	P	Q	N	E	L	P	P	L	Y	G	L	K	G	V	T	I	Q	F	R	T	P	T	A	F	K	Y	N	T	G	Y	V	P	E	F	Y	G	P	V	F
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S														T	T													S						T	T																	T	T					S
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	I	K	S	I	T	E	S	Y	R	R	I	I	P	G	C	P	E	F	S	T	S	D	I	L	K	Y	I	R	F	T	A	T	D	L	Q	K	G	K	Y	R	L	T	E	E	L	M	V	T	G	F	K	G	K	V	Y	L	Q	F	K	L	S	T	P	P	E	L	K	L	L	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	T	T											T	T						S											T	T																T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.
Sequence	L	Y	F	L	E	A	A	S	I	C	G	V	G	M	K	K	A	W	G	M	G	D	I	Y	I	T	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)												S	S	T	T	G	G	G	T	T	T						-