Standard Mode | Switch to Expert Mode | Login to view past jobsRetrieve Phyre Job Id
 
Subscribe to Phyre at Google Groups
Email:
Visit Phyre at Google Groups
  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6n9yA_

Fold library idPDB HeaderMoleculeTitle
c6n9yA_4.00PDB header: viral proteinChain: A: PDB Molecule: non-structural protein 1;


Added to library: Sat Mar 16 08:58:07 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence MERFLRKYNISGDYANATRTFLAISPQWTCSHLKRNCLFNGMCAKQNFERAMIAATDAEEPAKAYRLVEL
Predicted secondary structure























SS confidence





































































Known secondary structure (DSSP)
T

TTT




SSGGGB
SSSBTTTTTTTTT
 .........80.........90.........100.........110.........120.........130.........140
Sequence AKEAMYDRETVWLQCFKSFSQPYEEDIEGKMKRCGAQLLEDYRKNGMMDEAVKQSALVNSERVRLDDSLS
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP) TTSS
S


S
STT

S


S

S


SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence AMPYIYVPIKEGQIVNPTFISRYRQIAYYFYSPNLADDWIDPNLFGIRGQHNQIKREIERQVNTCPYTGY
Predicted secondary structure





































SS confidence





































































Known secondary structure (DSSP)
GGGGS
SSSB


S
SS

TTS


TT
S
S
TTS

 .........220.........230.........240.........250.........260.........270.........280
Sequence KGRVLQVMFLPIQLINFLRMDDFAKHFNRYASMAIQQYLRVGYAEEVRYVQQLFGKIPTGEFPLHHMMLM
Predicted secondary structure














SS confidence





































































Known secondary structure (DSSP)






STTTSTTTTSTTTSS

SSS
TTSS
 .........290.........300.........310.........320.........330.........340.........350
Sequence RRDFPTRDRSIVEARVRRSGDENWQSWLLPMIIVREGLDHQDRWEWLIDYMDRKHTCQLCYLKHSKQIPT
Predicted secondary structure





























SS confidence





































































Known secondary structure (DSSP)



SS

S
TS


SSGGGTSSTT
SSTT
SSSTTT

S
 .........360.........370.........380.........390.........400.........410.........420
Sequence CGVIDVRASELTGCSPFKTVKIEEHVGNNSVFETKLVRDEQIGRIGDHYYTTNCYTGAEALITTAIHIHR
Predicted secondary structure





















SS confidence





































































Known secondary structure (DSSP)
T
S
S
SS








SSTT

STT
 .........430.........440.........450.........460.........470.........480.........490
Sequence WIRGCGIWNDEGWREGIFMLGRVLLRWELTKAQRSALLRLFCFVCYGYAPRADGTIPDWNNLGSFLDTIL
Predicted secondary structure



























SS confidence





































































Known secondary structure (DSSP) STT
SSS
GGGS


TTTT


TTS






 .........500.........510.........520.........530.........540.........550..
Sequence KGPELSEDEDERAYATMFEMVRCIITLCYAEKVHFAGFAAPACESGEVINLAARMSQMRMEY
Predicted secondary structure






















SS confidence





























































Known secondary structure (DSSP) S




T






S




S
ST


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

Phyre is now FREE for commercial users!

All images and data generated by Phyre2 are free to use in any publication with acknowledgement

Accessibility Statement
Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
© Structural Bioinformatics Group,
Imperial College,
London
Michael Sternberg

Disclaimer

Terms and Conditions