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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6n9lA_

Fold library idPDB HeaderMoleculeTitle
c6n9lA_2.01PDB header: dna binding proteinChain: A: PDB Molecule: uvrabc system protein a;


Added to library: Sat May 4 10:11:33 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence NEIVVKGARVHNLKNITVRIPKNRLVVITGVSGSGKSSLAMDTIYAEGQRRYLESLSTYKKPDVDEIEGL
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Known secondary structure (DSSP)

STT

SSSS
STTSSTTTTTSTT



S
ST
 .........80.........90.........100.........110.........120.........130.........140
Sequence SPAIAIDQKTVSHNPRSTVGTVTEIYDYLRVLYARIGKKINGLNIHEFTELSISEELEFLKNLNLTERER
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Known secondary structure (DSSP)

SSSS



TT
BTTTT
S
BTTB
TSBT



SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence EIVGELLKEIEKRLEFLVDVGLEYLTLSRSATTLSGGESQRIRLATQIGSGLTGVIYVLDEPTIGLHPRD
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Known secondary structure (DSSP) TT
TT
BTTSBGGGS
T

S

TTTT

GGG
 .........220.........230.........240.........250.........260.........270.........280
Sequence TERLIKTLKKLRDLGNTVIVVEHDEEVIRNADHIIDIGPGGGTNGGRVVFQGTVDELLKNPDSSLTGEYL
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Known secondary structure (DSSP) TT



T
SSSSGGG


S
TT
 .........290.........300.........310.........320.........330.........340.........350
Sequence SGKRKITVNKTRRLPYASLKIKGVRHNNLKNIDVEIPLGVFVCVTGVSGSGKSSLVMETLYPALMNLLHK
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Known secondary structure (DSSP) TTSS




SS



S
STT

SSS
STTSSTTTSS
 .........360.........370.........380.........390.........400.........410.........420
Sequence TKLPAGEFDSIEGHENIDKMIAIDQSPIGRTPRSNPATYTKVFDEIRSLFAMTPAAKARGYNKSRFSFNL
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Known secondary structure (DSSP)





S
S
GGG
S

SS
S
SSTT

TTTST

GGGG
TTS
 .........430.........440.........450.........460.........470.........480.........490
Sequence KGGRCEACQGQGYVKIEMLFLPDVYVECDVCKGKRYNRETLEITYKGKNISDILDMTVDEALEFFKNIPS
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Known secondary structure (DSSP) TTTB
TTTTTSS


SSS



TTTTT
SB
T

BTTB
TSBTTT
 .........500.........510.........520.........530.........540.........550.........560
Sequence IKRTLQVLHDVGLGYVKLGQPATTLSGGEAQRIKLASELRKRDTGRTLYILDEPTVGLHFEDVRKLVEVL
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Known secondary structure (DSSP) TT
TTSBTT

GGGS

S


S
TTTT

 .........570.........580.........590.........600.........610.........620.....
Sequence HRLVDRGNTVIVIEHNLDVIKNADHIIDLGPEGGKEGGYIVATGTPEEIAKNPHSYTGRFLKNVL
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Known secondary structure (DSSP) TT



TT
SSSSGGG


T
TT
TTT


Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol


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Accessibility Statement
Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction
Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960
 
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Michael Sternberg  
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