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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6mzcG_

Fold library idPDB HeaderMoleculeTitle
c6mzcG_4.50PDB header: transcriptionChain: G: PDB Molecule: transcription initiation factor tfiid subunit 5;


Added to library: Sat Dec 1 12:11:37 2018
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence DPTMYEEYYSGLKHFIECSLDCHRAELSQLFYPLFVHMYLELVYNQHENEAKSFFEKFHGDQECYYQDDL
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Known secondary structure (DSSP)
TS
GGGT
STTS
TT
 .........80.........90.........100.........110.........120.........130.........140
Sequence RVLSSLTKKEHMKGNETMLDFRTSKFVLRISRDSYQLLKRHLQEKQNNQIWNIVQEHLYIDIFDLPSICF
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Known secondary structure (DSSP) T

S
TTSSS


B


TT
SS


B







B
 .........150.........160.........170.........180.........190.........200.........210
Sequence YTFLNAYQGLTAVDVTDDSSLIAGGFADSTVRVXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
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SSSS
SSS
SSS



TTST
SS
SGGG



S
 .........220.........230.........240.........250.........260.........270.........280
Sequence XXXKILYGHSGPVYGASFSPDRNYLLSSSEDGTVRLWSLQTFTCLVGYKGHNYPVWDTQFSPYGYYFVSG
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Known secondary structure (DSSP)
SS



S



TTS


SSS

SSS
S
S
SS



SS
SS
 .........290.........300.........310.........320.........330.........340.........350
Sequence GHDRVARLWATDHYQPLRIFAGHLADVNCTRFHPNSNYVATGSADRTVRLWDVLNGNCVRIFTGHKGPIH
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Known secondary structure (DSSP)
SSS

SS

S
S
B


SSS

SSTT
TTS

SSS




SS
 .........360.........370.........380.........390.........400.........410.........420
Sequence SLTFSPNGRFLATGATDGRVLLWDIGHGLMVGELKGHTDTVCSLRFSRDGEILASGSMDNTVRLWDAIKA
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Known secondary structure (DSSP)
SSS
TTTSSS



S
S

SSSSTTT



 .........430.........440.........450.........460.........470...
Sequence FEDLETDDFTTATGHINLPENSQELLLGTYMTKSTPVVHLHFTRRNLVLAAGA
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Known secondary structure (DSSP)

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SS




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Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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