PHYRE Protein Fold Recognition Server

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Protein Homology/analogY Recognition Engine V 2.2

Fold library entry viewer: c6mfzA_

Fold library id	PDB Header	Molecule	Title
c6mfzA_	6.00	PDB header: ligase	Chain: A: PDB Molecule: linear gramicidin synthase subunit a;

Links to external resources
Added to library: Sat Nov 23 11:58:21 2019

1 . . . . . . . . 10 . . . . . . . . . 20 . . . . . . . . . 30 . . . . . . . . . 40 . . . . . . . . . 50 . . . . . . . . . 60 . . . . . . . . . 70

Sequence M G R I L F L T T F M S K G N K V V R Y L E S L H H E V V I C Q E K V H A Q S A N L Q E I D W I V S Y A Y G Y I L D K E I V S R F R G R I I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S T T S
T T
S
S S S T T T S S
S S
S S
T T T T T

. . . . . . . . . 80 . . . . . . . . . 90 . . . . . . . . . 100 . . . . . . . . . 110 . . . . . . . . . 120 . . . . . . . . . 130 . . . . . . . . . 140

Sequence N L H P S L L P W N K G R D P V F W S V W D E T P K G V T I H L I D E H V D T G D I L V Q E E I A F A D E D T L L D C Y N K A N Q A I E E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S
T T S S
B S
T T
S S T T
S
S S S B

. . . . . . . . . 150 . . . . . . . . . 160 . . . . . . . . . 170 . . . . . . . . . 180 . . . . . . . . . 190 . . . . . . . . . 200 . . . . . . . . . 210

Sequence F I R E W E N I V H G R I A P Y R Q T A G G T L H F K A D R D F Y K N L N M T T V R E L L A L K R L C A E P K R G E K P I D K T F H Q L F E

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T S T T T T T S
S
B
S
B
S G G G G G G T T
S S S B T T
T T

. . . . . . . . . 220 . . . . . . . . . 230 . . . . . . . . . 240 . . . . . . . . . 250 . . . . . . . . . 260 . . . . . . . . . 270 . . . . . . . . . 280

Sequence Q Q V E M T P D H V A V V D R G Q S L T Y K Q L N E R A N Q L A H H L R G K G V K P D D Q V A I M L D K S L D M I V S I L A V M K A G G A Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S T T T
T T
S S T

. . . . . . . . . 290 . . . . . . . . . 300 . . . . . . . . . 310 . . . . . . . . . 320 . . . . . . . . . 330 . . . . . . . . . 340 . . . . . . . . . 350

Sequence V P I D P D Y P G E R I A Y M L A D S S A A I L L T N A L H E E K A N G A C D I I D V H D P D S Y S E N T N N L P H V N R P D D L V Y V M Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S
S S S S G G G T T
S
T T
G G G S
S
S
T T S

. . . . . . . . . 360 . . . . . . . . . 370 . . . . . . . . . 380 . . . . . . . . . 390 . . . . . . . . . 400 . . . . . . . . . 410 . . . . . . . . . 420

Sequence T S G S T G L A K G V M I E H H N L V N F C E W Y R P Y F G V T P A D K A L V Y S S F S F D G S A L D I F T H L L A G A A L H I V P S E R K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S S S S
T
T T
S
T T S T T T
G G G T

. . . . . . . . . 430 . . . . . . . . . 440 . . . . . . . . . 450 . . . . . . . . . 460 . . . . . . . . . 470 . . . . . . . . . 480 . . . . . . . . . 490

Sequence Y D L D A L N D Y C N Q E G I T I S Y L P T G A A E Q F M Q M D N Q S F R V V I T G G D V L K K I E R N G T Y K L Y N G Y G P T E C T I M V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T
T T S
S S
S S S
S S S S
G G G S S
S

. . . . . . . . . 500 . . . . . . . . . 510 . . . . . . . . . 520 . . . . . . . . . 530 . . . . . . . . . 540 . . . . . . . . . 550 . . . . . . . . . 560

Sequence T M F E V D K P Y A N I P I G K P I D R T R I L I L D E A L A L Q P I G V A G E L F I V G E G L G R G Y L N R P E L T A E K F I V H P Q T G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
B
T T
T T S
B
T T
T T
S T T
S S S

. . . . . . . . . 570 . . . . . . . . . 580 . . . . . . . . . 590 . . . . . . . . . 600 . . . . . . . . . 610 . . . . . . . . . 620 . . . . . . . . . 630

Sequence E R M Y R T G D R A R F L P D G N I E F L G R L D N L V K I R G Y R I E P G E I E P F L M N H P L I E L T T V L A K E Q A D G R K Y L V G Y

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S
S S
S S S
G G G G T S T T
T T S

. . . . . . . . . 640 . . . . . . . . . 650 . . . . . . . . . 660 . . . . . . . . . 670 . . . . . . . . . 680 . . . . . . . . . 690 . . . . . . . . . 700

Sequence Y V A P E E I P H G E L R E W L G N D L P D Y M I P T Y F V H M K A F P L T A N G K V D R R A L P D V Q A D V A P T D E L E Q Q L A Q V W S

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
T T T S
G G G S
S S S
B
S S S
B
S S S
S

. . . . . . . . . 710 . . . . . . . . . 720 . . . . . . . . . 730 . . . . . . . . . 740 . . . . . . . . . 750 . . . . . . . . . 760 . . . . . . . . . 770

Sequence H V L G I P Q M G I D D H F L E R G G D S I K V M Q L I H Q L K N I G L S L R Y D Q L F T H P T I R Q L K R L L T E Q K Q V S L E P L R E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
T T
S G G G S
T T T T
S T T S

. . . . . . . . . 780 . . . . . . . . . 790 . . . . . . . . . 800 . . . . . . . . . 810 . . . . . . . . . 820 . . . . . . . . . 830 . . . . . . . . . 840

Sequence D E Q A E Y E T S A V E K R M Y I I Q Q Q D V E S I A Y N V V Y T I N F P L T V D T E Q I R V A L E Q L V L R H E G L R S T Y H M R G D E I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S B
S T T
T T
T T S
S G G G T T

. . . . . . . . . 850 . . . . . . . . . 860 . . . . . . . . . 870 . . . . . . . . . 880 . . . . . . . . . 890 . . . . . . . . . 900 . . . . . . . . . 910

Sequence V K R I V P R A E L S F V R Q T G E E E S V Q S L L A E Q I K P F D L A K A P L L R A G V I E T A D K K V L W F D S H H I L L D G L S K S I

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S
S S
S
T T S S
S S
T T T
S

. . . . . . . . . 920 . . . . . . . . . 930 . . . . . . . . . 940 . . . . . . . . . 950 . . . . . . . . . 960 . . . . . . . . . 970 . . . . . . . . . 980

Sequence L A R E L Q A L L G Q Q V L S P V E K T Y K S F A R W Q N E W F A S D E Y E Q Q I A Y W K T L L Q G E L P A V Q L P T K K R P P Q L T F D G

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T
S
T T S S T T S
S
S
S S
B

. . . . . . . . . 990 . . . . . . . . . 1000 . . . . . . . . . 1010 . . . . . . . . . 1020 . . . . . . . . . 1030 . . . . . . . . . 1040 . . . . . . . . . 1050

Sequence A I Q M Y R V N P E I T R K L K A T A A K H D L T L Y M L M L T I V S I W L S K M N S D S N Q V I L G T V T D G R Q H P D T R E L L G M F V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
T T S
S
S G G G T T
S

. . . . . . . . . 1060 . . . . . . . . . 1070 . . . . . . . . . 1080 . . . . . . . . . 1090 . . . . . . . . . 1100 . . . . . . . . . 1110 . . . . . . . . . 1120

Sequence N T L P L L L S I D H E E S F L H N L Q Q V K A K L L P A L Q N Q Y V P F D K I L E A A R V K R E G N R H P L F D V M F M M Q G A P E T E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T S B T
S
T T T
S S S
S S
S
S S

. . . . . . . . . 1130 . . . . . . . . . 1140 . . . . . . . . . 1150 . . . . . . . . . 1160 . . . . . . . . . 1170 . . . . . . . . . 1180 . . . . . . . . . 1190

Sequence E S N M H H I N A G I S K F D L T L E V L E R E N G L N I V F E Y N T H L F D E G M I L R M V A Q F E H L L L Q A V H G L D Q Q V K R F E L

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T
S B
S S S T T T T T
S
S S S B S T T

. . . . . . . . . 1200 . . . . . . . . . 1210 . . . . . . . . . 1220 . . . . . . . . . 1230 . . . . . . . . . 1240 . . . . . . . . . 1250 . . . . . . . . . 1260

Sequence V T E D E K R D L F L R V N D T A K A Y P N K L I M S M L E D W A A A T P D K T A L V F R E Q R V T Y R E L N E R V N Q L A H T L R E K G V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T S
T T S T T T

. . . . . . . . . 1270 . . . . . . . . . 1280 . . . . . . . . . 1290 . . . . . . . . . 1300 . . . . . . . . . 1310 . . . . . . . . . 1320 . . . . . . . . . 1330

Sequence Q P D D L V M L M A E R S V E M M V A I F A V L K A G G A Y L P I D P H S P A E R I A Y I F A D S G A K L V L A Q S P F V E K A S M A E V V

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
T T
S S T S
T T S
S
S
G G G S G G G T S
S S

. . . . . . . . . 1340 . . . . . . . . . 1350 . . . . . . . . . 1360 . . . . . . . . . 1370 . . . . . . . . . 1380 . . . . . . . . . 1390 . . . . . . . . . 1400

Sequence L D L N S A S S Y A A D T S N P P L V N Q P G D L V Y V M Y T S G S T G K P K G V M I E H G A L L N V L H G M Q D E Y P L L Q D D A F L L K

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S S S S
S
S
S
T T S
S S S
S
S S

. . . . . . . . . 1410 . . . . . . . . . 1420 . . . . . . . . . 1430 . . . . . . . . . 1440 . . . . . . . . . 1450 . . . . . . . . . 1460 . . . . . . . . . 1470

Sequence T T Y I F D I S V A E I F G W V P G R G K L V I L E P E A E K N P K A I W Q A V V G A G I T H I N F V P S M L I P F V E Y L E G R T E A N R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S
T T S S T T S T T T T
G G G S S
T
T T T T T S S
S
S

. . . . . . . . . 1480 . . . . . . . . . 1490 . . . . . . . . . 1500 . . . . . . . . . 1510 . . . . . . . . . 1520 . . . . . . . . . 1530 . . . . . . . . . 1540

Sequence L R Y I L A C G E A M P D E L V P K V Y E V L P E V K L E N I Y G P T E A T I Y A S R Y S L A K G S Q E S P V P I G K P L P N Y R M Y I I N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
S S
S S S
T T
S T T S S
S S
S S
S B
T T

. . . . . . . . . 1550 . . . . . . . . . 1560 . . . . . . . . . 1570 . . . . . . . . . 1580 . . . . . . . . . 1590 . . . . . . . . . 1600 . . . . . . . . . 1610

Sequence R H G Q L Q P I G V P G E L C I A G A S L A R G Y L N N P A L T E E K F T P H P L E K G E R I Y R T G D L A R Y R E D G N I E Y L G R M D H

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
B
S S
S T T
T T
T T S S S S
S S S
T T

. . . . . . . . . 1620 . . . . . . . . . 1630 . . . . . . . . . 1640 . . . . . . . . . 1650 . . . . . . . . . 1660 . . . . . . . . . 1670 . . . . . . . . . 1680

Sequence Q V K I R G Y R I E L D E I R S K L I Q E E T I Q D A V V V A R N D Q N G Q A Y L C A Y L L S E Q E W T V G Q L R E L L R R E L P E Y M I P

Predicted secondary structure

SS confidence

Known secondary structure (DSSP)
B T T B
T T S G G G
S S
S S S
S S
T T S
G G G S

. . . . . . . . . 1690 . . . . . . . . . 1700 . . . . . . . . . 1710 . . . . . . . . . 1720 . . . . . . . . . 1730 . . . . . . . . . 1740 . . . . . . . . . 1750

Sequence A H F V L L K Q F P L T A N G K L D R K A L P E A A P R T E L E A T L A H I W G E V L G I E R I G I R D N F F E L G G D S I K G L Q I A S R

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) S B
S S
B
S S
B
S S S S
S T
S S
T T
T T T T T

. . . . . . . . . 1760 . . . . . . . . . 1770 . . . . . . . . . 1780 . . . . . . . . .

Sequence L Q R I N W T M V I N H L F L Y P T I E Q I A P F V T S E Q V V I E A A A E N

Predicted secondary structure

SS confidence

Known secondary structure (DSSP) T T S
S T T T T G G G T T T S

Download: PDB structure FASTA sequence
Hidden Markov model

Image coloured by rainbow N → C terminus

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Accessibility Statement

Please cite: Phyre2.2: A Community Resource for Template-based Protein Structure Prediction

Powell HR et al. Journal of Molecular Biology (2025) in press DOI: https://doi.org/10.1016/j.jmb.2025.168960

© Structural Bioinformatics Group, Imperial College, London

Michael Sternberg

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	1	.	.	.	.	.	.	.	.	10	.	.	.	.	.	.	.	.	.	20	.	.	.	.	.	.	.	.	.	30	.	.	.	.	.	.	.	.	.	40	.	.	.	.	.	.	.	.	.	50	.	.	.	.	.	.	.	.	.	60	.	.	.	.	.	.	.	.	.	70
Sequence	M	G	R	I	L	F	L	T	T	F	M	S	K	G	N	K	V	V	R	Y	L	E	S	L	H	H	E	V	V	I	C	Q	E	K	V	H	A	Q	S	A	N	L	Q	E	I	D	W	I	V	S	Y	A	Y	G	Y	I	L	D	K	E	I	V	S	R	F	R	G	R	I	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)									S	S	T	T	S											T	T								S				S	S	S	T	T	T	S	S		S						S		S	S									T	T	T	T	T
	.	.	.	.	.	.	.	.	.	80	.	.	.	.	.	.	.	.	.	90	.	.	.	.	.	.	.	.	.	100	.	.	.	.	.	.	.	.	.	110	.	.	.	.	.	.	.	.	.	120	.	.	.	.	.	.	.	.	.	130	.	.	.	.	.	.	.	.	.	140
Sequence	N	L	H	P	S	L	L	P	W	N	K	G	R	D	P	V	F	W	S	V	W	D	E	T	P	K	G	V	T	I	H	L	I	D	E	H	V	D	T	G	D	I	L	V	Q	E	E	I	A	F	A	D	E	D	T	L	L	D	C	Y	N	K	A	N	Q	A	I	E	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S		T	T	S	S		B	S									T	T												S	S	T	T		S												S	S	S	B
	.	.	.	.	.	.	.	.	.	150	.	.	.	.	.	.	.	.	.	160	.	.	.	.	.	.	.	.	.	170	.	.	.	.	.	.	.	.	.	180	.	.	.	.	.	.	.	.	.	190	.	.	.	.	.	.	.	.	.	200	.	.	.	.	.	.	.	.	.	210
Sequence	F	I	R	E	W	E	N	I	V	H	G	R	I	A	P	Y	R	Q	T	A	G	G	T	L	H	F	K	A	D	R	D	F	Y	K	N	L	N	M	T	T	V	R	E	L	L	A	L	K	R	L	C	A	E	P	K	R	G	E	K	P	I	D	K	T	F	H	Q	L	F	E
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				T	S	T	T	T	T	T	S		S			B				S					B		S	G	G	G	G	G	G	T	T		S	S	S	B										T	T					T	T
	.	.	.	.	.	.	.	.	.	220	.	.	.	.	.	.	.	.	.	230	.	.	.	.	.	.	.	.	.	240	.	.	.	.	.	.	.	.	.	250	.	.	.	.	.	.	.	.	.	260	.	.	.	.	.	.	.	.	.	270	.	.	.	.	.	.	.	.	.	280
Sequence	Q	Q	V	E	M	T	P	D	H	V	A	V	V	D	R	G	Q	S	L	T	Y	K	Q	L	N	E	R	A	N	Q	L	A	H	H	L	R	G	K	G	V	K	P	D	D	Q	V	A	I	M	L	D	K	S	L	D	M	I	V	S	I	L	A	V	M	K	A	G	G	A	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S	S	S	S						T	T																							T			T	T									S	S														T
	.	.	.	.	.	.	.	.	.	290	.	.	.	.	.	.	.	.	.	300	.	.	.	.	.	.	.	.	.	310	.	.	.	.	.	.	.	.	.	320	.	.	.	.	.	.	.	.	.	330	.	.	.	.	.	.	.	.	.	340	.	.	.	.	.	.	.	.	.	350
Sequence	V	P	I	D	P	D	Y	P	G	E	R	I	A	Y	M	L	A	D	S	S	A	A	I	L	L	T	N	A	L	H	E	E	K	A	N	G	A	C	D	I	I	D	V	H	D	P	D	S	Y	S	E	N	T	N	N	L	P	H	V	N	R	P	D	D	L	V	Y	V	M	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)					T	T	S												S									S	S	S	S	G	G	G	T	T		S					T	T		G	G	G	S		S			S								T	T	S
	.	.	.	.	.	.	.	.	.	360	.	.	.	.	.	.	.	.	.	370	.	.	.	.	.	.	.	.	.	380	.	.	.	.	.	.	.	.	.	390	.	.	.	.	.	.	.	.	.	400	.	.	.	.	.	.	.	.	.	410	.	.	.	.	.	.	.	.	.	420
Sequence	T	S	G	S	T	G	L	A	K	G	V	M	I	E	H	H	N	L	V	N	F	C	E	W	Y	R	P	Y	F	G	V	T	P	A	D	K	A	L	V	Y	S	S	F	S	F	D	G	S	A	L	D	I	F	T	H	L	L	A	G	A	A	L	H	I	V	P	S	E	R	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S	S																							T			T	T							S		T	T	S												T	T	T								G	G	G	T
	.	.	.	.	.	.	.	.	.	430	.	.	.	.	.	.	.	.	.	440	.	.	.	.	.	.	.	.	.	450	.	.	.	.	.	.	.	.	.	460	.	.	.	.	.	.	.	.	.	470	.	.	.	.	.	.	.	.	.	480	.	.	.	.	.	.	.	.	.	490
Sequence	Y	D	L	D	A	L	N	D	Y	C	N	Q	E	G	I	T	I	S	Y	L	P	T	G	A	A	E	Q	F	M	Q	M	D	N	Q	S	F	R	V	V	I	T	G	G	D	V	L	K	K	I	E	R	N	G	T	Y	K	L	Y	N	G	Y	G	P	T	E	C	T	I	M	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S													T															T	T	S			S	S		S						S	S								S	S	S	S									G	G	G	S	S		S
	.	.	.	.	.	.	.	.	.	500	.	.	.	.	.	.	.	.	.	510	.	.	.	.	.	.	.	.	.	520	.	.	.	.	.	.	.	.	.	530	.	.	.	.	.	.	.	.	.	540	.	.	.	.	.	.	.	.	.	550	.	.	.	.	.	.	.	.	.	560
Sequence	T	M	F	E	V	D	K	P	Y	A	N	I	P	I	G	K	P	I	D	R	T	R	I	L	I	L	D	E	A	L	A	L	Q	P	I	G	V	A	G	E	L	F	I	V	G	E	G	L	G	R	G	Y	L	N	R	P	E	L	T	A	E	K	F	I	V	H	P	Q	T	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)							S			S	S		B						T	T								T	T	S		B			T	T										T	T			S			T	T													S	S	S
	.	.	.	.	.	.	.	.	.	570	.	.	.	.	.	.	.	.	.	580	.	.	.	.	.	.	.	.	.	590	.	.	.	.	.	.	.	.	.	600	.	.	.	.	.	.	.	.	.	610	.	.	.	.	.	.	.	.	.	620	.	.	.	.	.	.	.	.	.	630
Sequence	E	R	M	Y	R	T	G	D	R	A	R	F	L	P	D	G	N	I	E	F	L	G	R	L	D	N	L	V	K	I	R	G	Y	R	I	E	P	G	E	I	E	P	F	L	M	N	H	P	L	I	E	L	T	T	V	L	A	K	E	Q	A	D	G	R	K	Y	L	V	G	Y
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)														T	T	S								S	S					S	S	S					G	G	G	G						T	S	T	T												T	T	S
	.	.	.	.	.	.	.	.	.	640	.	.	.	.	.	.	.	.	.	650	.	.	.	.	.	.	.	.	.	660	.	.	.	.	.	.	.	.	.	670	.	.	.	.	.	.	.	.	.	680	.	.	.	.	.	.	.	.	.	690	.	.	.	.	.	.	.	.	.	700
Sequence	Y	V	A	P	E	E	I	P	H	G	E	L	R	E	W	L	G	N	D	L	P	D	Y	M	I	P	T	Y	F	V	H	M	K	A	F	P	L	T	A	N	G	K	V	D	R	R	A	L	P	D	V	Q	A	D	V	A	P	T	D	E	L	E	Q	Q	L	A	Q	V	W	S
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S												T	T	T	S		G	G	G	S		S						S	S			B		S	S	S		B		S	S	S												S
	.	.	.	.	.	.	.	.	.	710	.	.	.	.	.	.	.	.	.	720	.	.	.	.	.	.	.	.	.	730	.	.	.	.	.	.	.	.	.	740	.	.	.	.	.	.	.	.	.	750	.	.	.	.	.	.	.	.	.	760	.	.	.	.	.	.	.	.	.	770
Sequence	H	V	L	G	I	P	Q	M	G	I	D	D	H	F	L	E	R	G	G	D	S	I	K	V	M	Q	L	I	H	Q	L	K	N	I	G	L	S	L	R	Y	D	Q	L	F	T	H	P	T	I	R	Q	L	K	R	L	L	T	E	Q	K	Q	V	S	L	E	P	L	R	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S				T	T			S	G	G	G	S														T	T	T	T													S								T	T	S
	.	.	.	.	.	.	.	.	.	780	.	.	.	.	.	.	.	.	.	790	.	.	.	.	.	.	.	.	.	800	.	.	.	.	.	.	.	.	.	810	.	.	.	.	.	.	.	.	.	820	.	.	.	.	.	.	.	.	.	830	.	.	.	.	.	.	.	.	.	840
Sequence	D	E	Q	A	E	Y	E	T	S	A	V	E	K	R	M	Y	I	I	Q	Q	Q	D	V	E	S	I	A	Y	N	V	V	Y	T	I	N	F	P	L	T	V	D	T	E	Q	I	R	V	A	L	E	Q	L	V	L	R	H	E	G	L	R	S	T	Y	H	M	R	G	D	E	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				S	S	B																S	T	T			T	T										T	T	S																	S	G	G	G							T	T
	.	.	.	.	.	.	.	.	.	850	.	.	.	.	.	.	.	.	.	860	.	.	.	.	.	.	.	.	.	870	.	.	.	.	.	.	.	.	.	880	.	.	.	.	.	.	.	.	.	890	.	.	.	.	.	.	.	.	.	900	.	.	.	.	.	.	.	.	.	910
Sequence	V	K	R	I	V	P	R	A	E	L	S	F	V	R	Q	T	G	E	E	E	S	V	Q	S	L	L	A	E	Q	I	K	P	F	D	L	A	K	A	P	L	L	R	A	G	V	I	E	T	A	D	K	K	V	L	W	F	D	S	H	H	I	L	L	D	G	L	S	K	S	I
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)						S													S	S		S													T	T	S	S											S	S										T	T	T			S
	.	.	.	.	.	.	.	.	.	920	.	.	.	.	.	.	.	.	.	930	.	.	.	.	.	.	.	.	.	940	.	.	.	.	.	.	.	.	.	950	.	.	.	.	.	.	.	.	.	960	.	.	.	.	.	.	.	.	.	970	.	.	.	.	.	.	.	.	.	980
Sequence	L	A	R	E	L	Q	A	L	L	G	Q	Q	V	L	S	P	V	E	K	T	Y	K	S	F	A	R	W	Q	N	E	W	F	A	S	D	E	Y	E	Q	Q	I	A	Y	W	K	T	L	L	Q	G	E	L	P	A	V	Q	L	P	T	K	K	R	P	P	Q	L	T	F	D	G
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)										T	T							S														T	T	S	S													T	T	S								S		S				S	S				B
	.	.	.	.	.	.	.	.	.	990	.	.	.	.	.	.	.	.	.	1000	.	.	.	.	.	.	.	.	.	1010	.	.	.	.	.	.	.	.	.	1020	.	.	.	.	.	.	.	.	.	1030	.	.	.	.	.	.	.	.	.	1040	.	.	.	.	.	.	.	.	.	1050
Sequence	A	I	Q	M	Y	R	V	N	P	E	I	T	R	K	L	K	A	T	A	A	K	H	D	L	T	L	Y	M	L	M	L	T	I	V	S	I	W	L	S	K	M	N	S	D	S	N	Q	V	I	L	G	T	V	T	D	G	R	Q	H	P	D	T	R	E	L	L	G	M	F	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)																						T	T																			T	T	S		S													S	G	G	G	T	T			S
	.	.	.	.	.	.	.	.	.	1060	.	.	.	.	.	.	.	.	.	1070	.	.	.	.	.	.	.	.	.	1080	.	.	.	.	.	.	.	.	.	1090	.	.	.	.	.	.	.	.	.	1100	.	.	.	.	.	.	.	.	.	1110	.	.	.	.	.	.	.	.	.	1120
Sequence	N	T	L	P	L	L	L	S	I	D	H	E	E	S	F	L	H	N	L	Q	Q	V	K	A	K	L	L	P	A	L	Q	N	Q	Y	V	P	F	D	K	I	L	E	A	A	R	V	K	R	E	G	N	R	H	P	L	F	D	V	M	F	M	M	Q	G	A	P	E	T	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)											T	T	S	B																		T			S								T	T	T					S	S	S		S	S		S										S	S
	.	.	.	.	.	.	.	.	.	1130	.	.	.	.	.	.	.	.	.	1140	.	.	.	.	.	.	.	.	.	1150	.	.	.	.	.	.	.	.	.	1160	.	.	.	.	.	.	.	.	.	1170	.	.	.	.	.	.	.	.	.	1180	.	.	.	.	.	.	.	.	.	1190
Sequence	E	S	N	M	H	H	I	N	A	G	I	S	K	F	D	L	T	L	E	V	L	E	R	E	N	G	L	N	I	V	F	E	Y	N	T	H	L	F	D	E	G	M	I	L	R	M	V	A	Q	F	E	H	L	L	L	Q	A	V	H	G	L	D	Q	Q	V	K	R	F	E	L
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T							S	B		S	S	S									T	T										T	T	T			S																					S	S	S	B	S	T	T
	.	.	.	.	.	.	.	.	.	1200	.	.	.	.	.	.	.	.	.	1210	.	.	.	.	.	.	.	.	.	1220	.	.	.	.	.	.	.	.	.	1230	.	.	.	.	.	.	.	.	.	1240	.	.	.	.	.	.	.	.	.	1250	.	.	.	.	.	.	.	.	.	1260
Sequence	V	T	E	D	E	K	R	D	L	F	L	R	V	N	D	T	A	K	A	Y	P	N	K	L	I	M	S	M	L	E	D	W	A	A	A	T	P	D	K	T	A	L	V	F	R	E	Q	R	V	T	Y	R	E	L	N	E	R	V	N	Q	L	A	H	T	L	R	E	K	G	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S												T	S																							T	T	S						T	T																						T
	.	.	.	.	.	.	.	.	.	1270	.	.	.	.	.	.	.	.	.	1280	.	.	.	.	.	.	.	.	.	1290	.	.	.	.	.	.	.	.	.	1300	.	.	.	.	.	.	.	.	.	1310	.	.	.	.	.	.	.	.	.	1320	.	.	.	.	.	.	.	.	.	1330
Sequence	Q	P	D	D	L	V	M	L	M	A	E	R	S	V	E	M	M	V	A	I	F	A	V	L	K	A	G	G	A	Y	L	P	I	D	P	H	S	P	A	E	R	I	A	Y	I	F	A	D	S	G	A	K	L	V	L	A	Q	S	P	F	V	E	K	A	S	M	A	E	V	V
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)		T	T									S	S														T	S							T	T	S												S			S						G	G	G	S	G	G	G	T	S		S	S
	.	.	.	.	.	.	.	.	.	1340	.	.	.	.	.	.	.	.	.	1350	.	.	.	.	.	.	.	.	.	1360	.	.	.	.	.	.	.	.	.	1370	.	.	.	.	.	.	.	.	.	1380	.	.	.	.	.	.	.	.	.	1390	.	.	.	.	.	.	.	.	.	1400
Sequence	L	D	L	N	S	A	S	S	Y	A	A	D	T	S	N	P	P	L	V	N	Q	P	G	D	L	V	Y	V	M	Y	T	S	G	S	T	G	K	P	K	G	V	M	I	E	H	G	A	L	L	N	V	L	H	G	M	Q	D	E	Y	P	L	L	Q	D	D	A	F	L	L	K
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			S	S	S	S		S			S			S								T	T	S										S	S	S																							S				S	S
	.	.	.	.	.	.	.	.	.	1410	.	.	.	.	.	.	.	.	.	1420	.	.	.	.	.	.	.	.	.	1430	.	.	.	.	.	.	.	.	.	1440	.	.	.	.	.	.	.	.	.	1450	.	.	.	.	.	.	.	.	.	1460	.	.	.	.	.	.	.	.	.	1470
Sequence	T	T	Y	I	F	D	I	S	V	A	E	I	F	G	W	V	P	G	R	G	K	L	V	I	L	E	P	E	A	E	K	N	P	K	A	I	W	Q	A	V	V	G	A	G	I	T	H	I	N	F	V	P	S	M	L	I	P	F	V	E	Y	L	E	G	R	T	E	A	N	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S		T	T	S	S							T	T	S	T	T	T	T								G	G	G	S	S													T								T	T	T							T	T	S	S		S				S
	.	.	.	.	.	.	.	.	.	1480	.	.	.	.	.	.	.	.	.	1490	.	.	.	.	.	.	.	.	.	1500	.	.	.	.	.	.	.	.	.	1510	.	.	.	.	.	.	.	.	.	1520	.	.	.	.	.	.	.	.	.	1530	.	.	.	.	.	.	.	.	.	1540
Sequence	L	R	Y	I	L	A	C	G	E	A	M	P	D	E	L	V	P	K	V	Y	E	V	L	P	E	V	K	L	E	N	I	Y	G	P	T	E	A	T	I	Y	A	S	R	Y	S	L	A	K	G	S	Q	E	S	P	V	P	I	G	K	P	L	P	N	Y	R	M	Y	I	I	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)								S	S				S	S	S									T	T										S	T	T	S	S									S	S				S	S					S	B		T	T
	.	.	.	.	.	.	.	.	.	1550	.	.	.	.	.	.	.	.	.	1560	.	.	.	.	.	.	.	.	.	1570	.	.	.	.	.	.	.	.	.	1580	.	.	.	.	.	.	.	.	.	1590	.	.	.	.	.	.	.	.	.	1600	.	.	.	.	.	.	.	.	.	1610
Sequence	R	H	G	Q	L	Q	P	I	G	V	P	G	E	L	C	I	A	G	A	S	L	A	R	G	Y	L	N	N	P	A	L	T	E	E	K	F	T	P	H	P	L	E	K	G	E	R	I	Y	R	T	G	D	L	A	R	Y	R	E	D	G	N	I	E	Y	L	G	R	M	D	H
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	T	T	S		B			S	S									S	T	T						T	T													T	T	S	S	S	S													S	S	S								T	T
	.	.	.	.	.	.	.	.	.	1620	.	.	.	.	.	.	.	.	.	1630	.	.	.	.	.	.	.	.	.	1640	.	.	.	.	.	.	.	.	.	1650	.	.	.	.	.	.	.	.	.	1660	.	.	.	.	.	.	.	.	.	1670	.	.	.	.	.	.	.	.	.	1680
Sequence	Q	V	K	I	R	G	Y	R	I	E	L	D	E	I	R	S	K	L	I	Q	E	E	T	I	Q	D	A	V	V	V	A	R	N	D	Q	N	G	Q	A	Y	L	C	A	Y	L	L	S	E	Q	E	W	T	V	G	Q	L	R	E	L	L	R	R	E	L	P	E	Y	M	I	P
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)				B	T	T	B				T	T	S	G	G	G						S	S												S	S	S											S	S													T	T	S		G	G	G	S
	.	.	.	.	.	.	.	.	.	1690	.	.	.	.	.	.	.	.	.	1700	.	.	.	.	.	.	.	.	.	1710	.	.	.	.	.	.	.	.	.	1720	.	.	.	.	.	.	.	.	.	1730	.	.	.	.	.	.	.	.	.	1740	.	.	.	.	.	.	.	.	.	1750
Sequence	A	H	F	V	L	L	K	Q	F	P	L	T	A	N	G	K	L	D	R	K	A	L	P	E	A	A	P	R	T	E	L	E	A	T	L	A	H	I	W	G	E	V	L	G	I	E	R	I	G	I	R	D	N	F	F	E	L	G	G	D	S	I	K	G	L	Q	I	A	S	R
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)	S	B					S	S			B		S	S			B		S	S	S	S							S														T			S	S			T	T			T	T	T	T	T
	.	.	.	.	.	.	.	.	.	1760	.	.	.	.	.	.	.	.	.	1770	.	.	.	.	.	.	.	.	.	1780	.	.	.	.	.	.	.	.	.
Sequence	L	Q	R	I	N	W	T	M	V	I	N	H	L	F	L	Y	P	T	I	E	Q	I	A	P	F	V	T	S	E	Q	V	V	I	E	A	A	A	E	N
Predicted secondary structure
SS confidence
Known secondary structure (DSSP)			T	T	S													S	T	T	T	T	G	G	G	T	T	T	S