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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6me5A_

Fold library idPDB HeaderMoleculeTitle
c6me5A_3.20PDB header: membrane proteinChain: A: PDB Molecule: chimera protein of melatonin receptor type 1a and glga


Added to library: Sat Apr 27 09:55:16 2019
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence PSWLASALACVLIFTIVVDILGNLLVILSVYRNKKLRNAGNIFVVSLAVANLVVAIYPYPLVLMSIFNNG
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Known secondary structure (DSSP)

SSS

GGGTSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence WNFGYLHCQVSAFLMGLSVIGSIWNITGIAIDRYLYICHSLKYDKLYSSKNSLCYVLLIWLLTLAAVLPN
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Known secondary structure (DSSP)

S
S
SS



TTT
 .........150.........160.........170.........180.........190.........200.........210
Sequence LRAGTLQYDPRIYSCTFAQSVSSAYTIAVVVFHFLVPMIIVIFCYLRIWILVLQVRGIDSFWNESYLTGS
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Known secondary structure (DSSP) T
GGGT
TTT
T



S
GGG

S
 .........220.........230.........240.........250.........260.........270.........280
Sequence RDERKKSLLSKFGMDEGVTFMFIGRFDRGQKGVDVLLKAIEILSSKKEFQEMRFIIIGKGDPELEGWARS
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Known secondary structure (DSSP) TT

SSS
B
SSSS
TSGGGGG

B
 .........290.........300.........310.........320.........330.........340.........350
Sequence LEEKHGNVKVITEMLSREFVRELYGSVDFVIIPSYFEPFGLVALEAMCLGAIPIASAVGGLRDIITNETG
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Known secondary structure (DSSP)
TT
S



S

SS
SS
TTT


TT

TTTS
 .........360.........370.........380.........390.........400.........410.........420
Sequence ILVKAGDPGELANAILKALELSRSDLSKFRENCKKRAMSFSKLKPQDFRNFVTMFVVFVLFAICFAPLNF
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Known secondary structure (DSSP)
TT
S

TTTS
T
 .........430.........440.........450.........460.........470.........480....
Sequence IGLAVASDPASMVPRIPEWLFVASYYMAYFNSCLNPIIYGLLDQNFRKEYRRIIVSLCTARVFF
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Known secondary structure (DSSP)
S

S





Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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