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  Protein Homology/analogY Recognition Engine V 2.2
 

Fold library entry viewer: c6m7dA_

Fold library idPDB HeaderMoleculeTitle
c6m7dA_2.90PDB header: nuclear protein/rnaChain: A: PDB Molecule: nucleoprotein;


Added to library: Sat Mar 27 08:29:29 2021
 
Links to external resources


 1........10.........20.........30.........40.........50.........60.........70
Sequence GLLSTFDTFSSRRSESINKSGGGAVIPGQRSTVSVFVLGPSVTDDADKLSIATTFLAHSLDTDKQHSQRG
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SSS
 .........80.........90.........100.........110.........120.........130.........140
Sequence GFLVSLLAMAYSSPELYLTTNGVNADVKYVIYNIEKDPKRTKTDGFIVKTRDMEYERTTEWLFGPMVNKS
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Known secondary structure (DSSP) TTSSS


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SS

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SS
 .........150.........160.........170.........180.........190.........200.........210
Sequence PLFQGQRDAADPDTLLQIYGYPACLGAIIVQVWIVLVKAITSSAGLRKGFFNRLEAFRQDGTVKGALVFT
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SB


TT


S
TT
STTTSS
GGG
B
 .........220.........230.........240.........250.........260.........270.........280
Sequence GETVEGIGSVMRSQQSLVSLMVETLVTMNTARSDLTTLEKNIQIVGNYIRDAGLASFMNTIKYGVETKMA
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Known secondary structure (DSSP)
S

SSS


TTTT
TSS

G
 .........290.........300.........310.........320.........330.........340.........350
Sequence ALTLSNLRPDINKLRSLIDTYLSKGPRAPFICILKDPVHGEFAPGNYPALWSYAMGVAVVQNKAMQQYVT
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Known secondary structure (DSSP) GGGSSSSSGGGGGGTTTTT
GGGGGGSGGGS
SGGGGS

 .........360.........370.........380.........390.........400.........410..
Sequence GRTYLDMEMFLLGQAVAKDAESKISSALEDELGVTDTAKERLRHHLANLSGGDGAYHKPTGG
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Known secondary structure (DSSP)

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S








Download:PDB structure FASTA sequence

Hidden Markov model

Image coloured by rainbow N → C terminus
Interactive 3D view in JSmol

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Please cite: The Phyre2 web portal for protein modeling, prediction and analysis
Kelley LA et al. Nature Protocols 10, 845-858 (2015) [paper] [Citation link]
 
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Michael Sternberg

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